ggKbase home page

scnpilot_p_inoc_scaffold_32_curated_218

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(248228..248932)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP25_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 231.0
  • Bit_score: 294
  • Evalue 1.00e-76
winged helix family two component transcriptional regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 231.0
  • Bit_score: 294
  • Evalue 3.10e-77
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACU58722.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 231.0
  • Bit_score: 294
  • Evalue 1.40e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 705
ATGGAATCATCGAAAGGTAAGATACTGATAGTGGACGATGAGCAGGATATCGTTGAGTTTATTAAATATAATCTCAATAAGGAGGGTTTTGAAACCATGTCCGCCTATGATGGTGTGGAGGCCGTGAGAAATGCGAAGCTTTTTAAGCCCGACCTGATATTGCTGGATATGATGATGCCCATCAAGGATGGCATGCAGGCTATCAGGGAGCTGAGAAGCAACCCGGATTTCGACGCTACCGTTATTATTTTCCTGACAGCTATGAGCGATGAAGCGTCTGAGATCAAAGGCCTGGAGGCCGGGGCGGACGACTATATAGCCAAGCCCATTAAAACGGAGCTGCTGCTGACCCGGGTTAAGGCTGCGCTCAGGAGGGCCAATACCGAGAAGCCTGCCGCCACTGATAATGACGAGGAGGTGATCGCTTTCGGCGACCTGGAGATCAACCGGACAAAATTTACGGTCTATTATAAGAACGAGGAGCTGGTGCTGGCCAAGAAGGAATTTGAGCTGCTGAGCCTGCTGGCTTCCAAGCCCGGCCGGGTATTCCTGCGGAATGAGATACTGAATACGGTGTGGGGAACGGATGTGATAGTGGGAGACCGTACTATAGATGTCCATATCCGGAAAATAAGACAAAAGCTGAACCTGGACGTCATTACAACGGTAAAGGGTGTGGGATATAAATTTGAAATGCCTGAGTAA
PROTEIN sequence
Length: 235
MESSKGKILIVDDEQDIVEFIKYNLNKEGFETMSAYDGVEAVRNAKLFKPDLILLDMMMPIKDGMQAIRELRSNPDFDATVIIFLTAMSDEASEIKGLEAGADDYIAKPIKTELLLTRVKAALRRANTEKPAATDNDEEVIAFGDLEINRTKFTVYYKNEELVLAKKEFELLSLLASKPGRVFLRNEILNTVWGTDVIVGDRTIDVHIRKIRQKLNLDVITTVKGVGYKFEMPE*