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scnpilot_p_inoc_scaffold_32_curated

Search features with annotation key words

Displaying items 301-330 of 354 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_32_curated_301
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

328265..329518
DNA (1254bp) protein (418aa)
Radical SAM domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S584_PEDSD
DNA modification/repair radical SAM protein {ECO:0000313|EMBL:ETZ23127.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
radical SAM protein
scnpilot_p_inoc_scaffold_32_curated_302
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

329531..330316
DNA (786bp) protein (262aa)
DNA metabolism protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037A5496
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92452.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_32_curated_303
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

330426..331229
DNA (804bp) protein (268aa)
Uncharacterized protein {ECO:0000313|EMBL:BAP30917.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
scnpilot_p_inoc_scaffold_32_curated_304
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(331477..331797)
DNA (321bp) protein (107aa)
Putative histone H1-like protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJP9_CHIPD
histone H1-like protein
Putative histone H1-like protein {ECO:0000313|EMBL:ACU63809.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_305
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(331825..332685)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037D253E
Short-chain dehydrogenase {ECO:0000313|EMBL:KFC21600.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
short-chain dehydrogenase/reductase, oxidoreductase
scnpilot_p_inoc_scaffold_32_curated_306
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

332890..333786
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037DF79D
Uncharacterized protein {ECO:0000313|EMBL:AHF14685.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_307
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(333909..334982)
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EGE2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KJJ39178.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_308
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(335416..335883)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YRG0_CAPCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEN46680.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
scnpilot_p_inoc_scaffold_32_curated_309
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(336010..337092)
DNA (1083bp) protein (361aa)
Phenylacetate-CoA oxygenase/reductase, PaaK subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7M3_NIAKG
phenylacetate-CoA oxygenase/reductase subunit PaaK; K02613 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
Phenylacetate-CoA oxygenase/reductase, PaaK subunit {ECO:0000313|EMBL:AEW02278.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_32_curated_310
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(337134..338342)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNR2_9SPHI
Membrane protein {ECO:0000313|EMBL:AHF15211.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_311
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

338495..338974
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000370871E
Uncharacterized protein {ECO:0000313|EMBL:KIF31357.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_312
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

339130..340449
DNA (1320bp) protein (440aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XW33_PEDHD
major facilitator superfamily protein; K06902 MFS transporter, UMF1 family
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU04112.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_p_inoc_scaffold_32_curated_313
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(340434..341945)
DNA (1512bp) protein (504aa)
all-trans-retinol 13,14-reductase (EC:1.3.99.23); K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
All-trans-retinol 13,14-reductase {ECO:0000313|EMBL:ABQ04110.1}; EC=1.3.99.23 {ECO:0000313|EMBL:ABQ04110.1};; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
all-trans-retinol 13,14-reductase n=1 Tax=Niabella aurantiaca RepID=UPI00036EDA87
scnpilot_p_inoc_scaffold_32_curated_314
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(342020..342547)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEG5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63374.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_315
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(342578..343156)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQG2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16413.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_316
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(343172..344455)
DNA (1284bp) protein (428aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=883154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CIP 101113.;"
phosphoribosylamine--glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
Phosphoribosylamine--glycine ligase n=3 Tax=Myroides odoratimimus RepID=H1GRD8_9FLAO
scnpilot_p_inoc_scaffold_32_curated_317
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(344485..345864)
DNA (1380bp) protein (460aa)
Magnesium transporter n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HVM0_9SPHI
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
magnesium transporter; K06213 magnesium transporter
scnpilot_p_inoc_scaffold_32_curated_318
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(346002..346763)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEA3_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ79004.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_32_curated_319
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

347089..351597
DNA (4509bp) protein (1503aa)
Nitrous oxidase accessory protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R3C0_OWEHD
Uncharacterized protein {ECO:0000313|EMBL:KFD38098.1}; Flags: Fragment;; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
nitrous oxidase accessory protein
scnpilot_p_inoc_scaffold_32_curated_320
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

352005..353675
DNA (1671bp) protein (557aa)
C-terminal processing peptidase id=4368721 bin=GWF2_Bacteroidetes_35_48 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
C-terminal processing peptidase
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_p_inoc_scaffold_32_curated_321
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

353695..354330
DNA (636bp) protein (212aa)
Deoxynucleoside kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ48_CHIPD
deoxynucleoside kinase
Deoxynucleoside kinase {ECO:0000313|EMBL:ACU64286.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_322
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(354552..355724)
DNA (1173bp) protein (391aa)
Glycosyl transferase family 9 n=2 Tax=Niabella soli DSM 19437 RepID=H1NV54_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17711.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
heptosyltransferase family
scnpilot_p_inoc_scaffold_32_curated_323
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(355755..356378)
DNA (624bp) protein (208aa)
Putative membrane-associated phospholipid phosphatase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNI2_9SPHI
Putative membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:EOR93251.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
PA-phosphatase-like phosphoesterase
scnpilot_p_inoc_scaffold_32_curated_324
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(356380..357123)
DNA (744bp) protein (248aa)
Methyltransferase type 11 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAX3_CHIPD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACU59345.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_325
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(357157..359853)
DNA (2697bp) protein (899aa)
methionine synthase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
methionine synthase n=1 Tax=Segetibacter koreensis RepID=UPI000370C780
Uncharacterized protein {ECO:0000313|EMBL:KIC95987.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_p_inoc_scaffold_32_curated_326
unknown

Not on your lists

360050..360451
DNA (402bp) protein (134aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_327
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


360548..360796
DNA (249bp) protein (83aa)
50S ribosomal protein L31 type B n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI55_CHIPD
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_328
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


360944..361141
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB79_CHIPD
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_329
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


361238..361582
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=1 Tax=Segetibacter koreensis RepID=UPI000368756D
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
50S ribosomal protein L20P; K02887 large subunit ribosomal protein L20
scnpilot_p_inoc_scaffold_32_curated_330
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


361634..361990
DNA (357bp) protein (119aa)
50S ribosomal protein L19 n=1 Tax=Segetibacter koreensis RepID=UPI00037BD493
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
Displaying items 301-330 of 354 in total

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