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scnpilot_p_inoc_scaffold_32_curated

Search features with annotation key words

Displaying items 31-60 of 354 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_32_curated_31
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(40417..41055)
DNA (639bp) protein (213aa)
LuxR family transcriptional regulator n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EHD1_9BURK
two component LuxR family transcriptional regulator
Tax=RBG_13_Nitrospirae_39_12_curated
scnpilot_p_inoc_scaffold_32_curated_32
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41810..43354
DNA (1545bp) protein (515aa)
Putative uncharacterized protein id=3541619 bin=GWF2_Bacteroidetes_41_31 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Delta-60 repeat-containing protein
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_p_inoc_scaffold_32_curated_33
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(43492..45258)
DNA (1767bp) protein (589aa)
PDK repeat-containing protein id=2089407 bin=GWE2_Bacteroidetes_42_42 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
PDK repeat-containing protein
Tax=GWF2_Bacteroidetes_43_63_curated
scnpilot_p_inoc_scaffold_32_curated_34
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45520..46071)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000368D503
Fe-S cluster assembly protein HesB {ECO:0000313|EMBL:KFF15860.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_35
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46089..46778)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HB37_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB91803.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_36
Nonlabens sediminis, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46992..48056)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000318C338
Uncharacterized protein {ECO:0000313|EMBL:GAK97227.1}; TaxID=319236 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens sediminis.;"
scnpilot_p_inoc_scaffold_32_curated_37
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

48304..50241
DNA (1938bp) protein (646aa)
Sensor histidine protein kinase UhpB {ECO:0000313|EMBL:ESU19501.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ESU19501.1};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
two-component system sensor histidine kinase (EC:2.7.13.3)
Sensor histidine protein kinase UhpB n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RYD4_9FLAO
scnpilot_p_inoc_scaffold_32_curated_38
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

50307..50963
DNA (657bp) protein (219aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain id=2606551 bin=GWF1_Flavobacteria_32_7 species=Formosa sp. AK20 genus=Formosa taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
two-component system response regulatory protein, LuxR family
Tax=GWF1_Flavobacteria_32_7_curated
scnpilot_p_inoc_scaffold_32_curated_39
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

51599..52039
DNA (441bp) protein (147aa)
Putative acetyltransferase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NT05_9BACT
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AFL84479.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_p_inoc_scaffold_32_curated_40
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

52045..53115
DNA (1071bp) protein (357aa)
amino acid racemase n=1 Tax=Anaerophaga thermohalophila RepID=UPI00031164AE
amino acid racemase
Amino acid racemase {ECO:0000313|EMBL:AFC24087.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
scnpilot_p_inoc_scaffold_32_curated_41
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53183..54610)
DNA (1428bp) protein (476aa)
Amino acid permease-associated region n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KQ63_HALH1
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family
Amino acid permease-associated region {ECO:0000313|EMBL:AEE54224.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_32_curated_42
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(54886..56310)
DNA (1425bp) protein (475aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X0L8_9PORP
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
nhaA_1; Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family
scnpilot_p_inoc_scaffold_32_curated_43
unknown

Not on your lists

56443..56877
DNA (435bp) protein (145aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_44
unknown

Not on your lists

57246..57467
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_45
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

57477..58139
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 3837 RepID=K1I7A4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KEQ30215.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
response regulator receiver
scnpilot_p_inoc_scaffold_32_curated_46
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

58259..59404
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5NWY5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ08690.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
scnpilot_p_inoc_scaffold_32_curated_47
unknown

Not on your lists

59438..59854
DNA (417bp) protein (139aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_48
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

59989..61422
DNA (1434bp) protein (478aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 PF8_9SPHI">RepID=U2HPF8_9SPHI
Exonuclease, DNA polymerase III, epsilon subunit family {ECO:0000313|EMBL:CDS93694.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
scnpilot_p_inoc_scaffold_32_curated_49
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

61572..62969
DNA (1398bp) protein (466aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLE1_CHIPD
Fis family transcriptional regulator
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AFD09165.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_32_curated_50
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(63060..63257)
DNA (198bp) protein (66aa)
ATPase protein K06915 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNS6_CHIPD
ATPase
ATPase protein K06915 {ECO:0000313|EMBL:ACU64176.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_51
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

63555..64307
DNA (753bp) protein (251aa)
Probable DNA repair protein HMPREF0766_10785 n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VIG6_9SPHI
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
DNA repair protein; K10979 DNA end-binding protein Ku
scnpilot_p_inoc_scaffold_32_curated_52
unknown

Not on your lists

comp(64865..65146)
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_53
unknown

Not on your lists

comp(65324..65563)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_32_curated_54
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

66180..66476
DNA (297bp) protein (99aa)
DNA-binding protein HU n=3 Tax=Acinetobacter baumannii RepID=G2JIC7_ACIBA
Histone family protein DNA-binding protein {ECO:0000313|EMBL:KGE16173.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
DNA-binding protein HU
scnpilot_p_inoc_scaffold_32_curated_55
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(66615..68213)
DNA (1599bp) protein (533aa)
L-aspartate oxidase; K00278 L-aspartate oxidase [EC:1.4.3.16]
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
L-aspartate oxidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLA4_CHIPD
scnpilot_p_inoc_scaffold_32_curated_56
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(68298..69197)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFZ4_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57977.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_57
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(69234..70781)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFZ5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57978.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_58
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(70847..71680)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFZ6_CHIPD
Gliding motility-associated protein GldL {ECO:0000313|EMBL:GAO45122.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_p_inoc_scaffold_32_curated_59
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(71747..73009)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFZ8_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57981.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_32_curated_60
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(73306..75318)
DNA (2013bp) protein (671aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG00_CHIPD
hypothetical protein; K06888
Uncharacterized protein {ECO:0000313|EMBL:ACU57983.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 31-60 of 354 in total

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