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scnpilot_p_inoc_scaffold_32_curated_49

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 61572..62969

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLE1_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 497.0
  • Bit_score: 346
  • Evalue 3.40e-92
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 497.0
  • Bit_score: 346
  • Evalue 1.10e-92
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AFD09165.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 425.0
  • Bit_score: 346
  • Evalue 4.70e-92

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Taxonomy

Solitalea canadensis → Solitalea → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1398
ATGAAACAATTATTAGTATTATGTGATGACCCTCTCTTTGCAAGAGCGCTTCGCGGCAGTATCCGGGACCCGCTCCTGCAGACTACCGTTATGGCTGATTTCAGGGAAAGCCTTAACTACATAGCAGAAGGGATGTTTGATGCCATTGCTGTATATACACCGCTCCTGTCCGAGAAATGCCCCAAAAAGATCATTAAGGCCATACAGCAGGTCAACGGATATATACCTGTATTTTTCCTCGCCGATAAGTTCAGCGTGCAGGAAGCCATTACCCTAGTAAAGGAAGGTGCCGAGAATTGCTATTCCAAGCCCTTCGCCCTGGAAGCCATTATCGAGAACATCCGGCAGACAGTCAGAGATGCCGCTGACCATAAGAAAGCCGGCAAGCGGCAGCCGGCCACGCCCAATTTCCTGAAAGCTACCAGCAAAGCTGCTGAGCATATGTTCCGGCAGATAGATATGGTAGCCGATACCAATTTCAAGGTGATCGTCTACGGCGAAACAGGAACAGGAAAGGAATCTGTAGCCAGGCGGCTAAGCGAAGGGGTTTATAAAGACAGGCCTTTTGTAGCGGTGGACTGCGGATGTCTCAGCAAAGAGCTGGCCGCAAGCGAGCTGTTCGGACACCAGAAAGGCAGCTTTACCAGCGCTACGGAAGATAAGATCGGCGCGTTCGAGCAGGCTAACAACGGCACCCTGTTCCTCGATGAGATCGGCAATCTTGATTACGGCGTACAGATCTTACTGCTCAGGGCCATAGAGGAGAAAAAGATAAGAAGGGTCGGCAGCAATAAAGAGATCGATGTGAATGTCAGGATCATAGTGGCATCCAATGAAAACCTGGCAGAGGCCGTAAGGAAAGGCAAATTCCGGGAAGACCTTTTTTACCGCCTGAACGAGTTTGAGATCAATATCCCTCCTCTACGGGAAAGAATGGAAGACCTGCCATTATTCGTTGATTTTTTTATCCAGGAAGCCAACCGAGACCTTAACAAACAGATACAGGGAGTAGACCCTTCCCTTCTACAACAATTTTCAGCATATCAGTGGCCGGGCAATATAAGGGAGCTTAAGAACATTATCAGAAGAGGCTGCCTGCTCGCCAAAGATCTTATTACACCATCCTGTTTATCCATTGAATTTATAAATAAAATGACAGCTCAAGATTTAGGAGTATTCCACGACGAAAGACCCGGCACCTCAGAATACGGTTTCCTGGAAGATTTGAAGTTTCAAAGTATCCAGGCCGAGTATGAAACCATCCAGAAGGTGCTTAAAGAAGAAAAGTATAACAAGACAAGGACCGCTAACCGGCTTAACATCAACCGGAAGACCTTGTATAACAAGATCAGCTATTACAAAAAACTGCTGAGCGTCATCCCGAAATTCGCCAGCTGA
PROTEIN sequence
Length: 466
MKQLLVLCDDPLFARALRGSIRDPLLQTTVMADFRESLNYIAEGMFDAIAVYTPLLSEKCPKKIIKAIQQVNGYIPVFFLADKFSVQEAITLVKEGAENCYSKPFALEAIIENIRQTVRDAADHKKAGKRQPATPNFLKATSKAAEHMFRQIDMVADTNFKVIVYGETGTGKESVARRLSEGVYKDRPFVAVDCGCLSKELAASELFGHQKGSFTSATEDKIGAFEQANNGTLFLDEIGNLDYGVQILLLRAIEEKKIRRVGSNKEIDVNVRIIVASNENLAEAVRKGKFREDLFYRLNEFEINIPPLRERMEDLPLFVDFFIQEANRDLNKQIQGVDPSLLQQFSAYQWPGNIRELKNIIRRGCLLAKDLITPSCLSIEFINKMTAQDLGVFHDERPGTSEYGFLEDLKFQSIQAEYETIQKVLKEEKYNKTRTANRLNINRKTLYNKISYYKKLLSVIPKFAS*