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scnpilot_p_inoc_scaffold_32_curated_191

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 223111..223671

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNM9_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 170.0
  • Bit_score: 130
  • Evalue 2.00e-27
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 170.0
  • Bit_score: 130
  • Evalue 6.20e-28
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW00955.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.6
  • Coverage: 170.0
  • Bit_score: 130
  • Evalue 2.80e-27

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGATAAACGGCTGCATCCGGGGAGATACCCGGATGCAGCAAGCGTTTTACTACCACTTTTACCCTATGCTCATGCGTATCTGTATCCGCTATGCGCCCAACAGGGAAGACGCGGAACAATGGGTGCAGGACAGCTTCCTGAAGCTGTTCCGGAACCTGGATAAGTATGAAGCCTGGGGATCATTTGAAGGCTGGATAAAAAGCATTGTGACCCGTGTATGCCTGGATCATATCCGCAGGTCGAATACCACGGCTTTTGAAGTGGAGCAACATACCGTCACCACCGATAAGATAGAATTGCTGGCCGATGATGTTCCCGTGCGTAACGAGGCCCTGCAGAAGTACAGCGGAGAAGCGGTGCTGCAGCTACTGAAAAAGCTGCCGGAAAAGCAGCGCGTGGTGCTGAACCTGTACGTGTATGAAGCCTACAGCCATAAAGAGATCGCGGAGATGCTCCGGATCAGTGAGAATTATTCCCACTGGCTGCTGCACCAGGCGAAGAAAACGCTGGCAGCGATCATTAATACAAGCCACCCCAAAAGCGTGAGTCATGAACAGTAA
PROTEIN sequence
Length: 187
MINGCIRGDTRMQQAFYYHFYPMLMRICIRYAPNREDAEQWVQDSFLKLFRNLDKYEAWGSFEGWIKSIVTRVCLDHIRRSNTTAFEVEQHTVTTDKIELLADDVPVRNEALQKYSGEAVLQLLKKLPEKQRVVLNLYVYEAYSHKEIAEMLRISENYSHWLLHQAKKTLAAIINTSHPKSVSHEQ*