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SCNpilot_bf_inoc_scaffold_1265_curated_1

Organism: scnpilot_dereplicated_Bacteroidia_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(48..347)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 PF0_9PORP">RepID=K5ZPF0_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 67.0
  • Bit_score: 66
  • Evalue 1.90e-08
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDD13770.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 67.0
  • Bit_score: 66
  • Evalue 2.60e-08

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Taxonomy

Parabacteroides merdae CAG:48 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 300
ATGGAAGAACAATTACAACATATTAAATTGCTGGCATTTCGTTATTTCGAAGGGAAGACCTCCCCGGAAGATGCCGAAGTATTATTTTCTTTCCTGAAAGAAGGTGATTTTAATCCATCGCTTTTCAGAAAGTGGGAAGACGAGTGGCTCTCATCTTTAGAATTTCAACCGGAACTGAACGAACGTTGGGAAAAAATAAAATTGGCAAACAGGAACACCGAATTCATAAAAAAATCGATCCCTGTTGTAAAATCCTACCGGAATTATATAATATACCCAAGAATTTGGACAACAGGTTAA
PROTEIN sequence
Length: 100
MEEQLQHIKLLAFRYFEGKTSPEDAEVLFSFLKEGDFNPSLFRKWEDEWLSSLEFQPELNERWEKIKLANRNTEFIKKSIPVVKSYRNYIIYPRIWTTG*