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scnpilot_dereplicated_Brevundimonas_1

scnpilot-dereplicated_Brevundimonas_diminuta_66_1

Consensus taxonomy: Brevundimonas diminuta  →  Brevundimonas  →  Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 418 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_300_bf_scaffold_3269_curated
Species: Brevundimonas diminuta (50%)
8 6436 bp 71.43 1.00 99.10
SCNpilot_cont_300_bf_scaffold_8762_curated
Species: Brevundimonas diminuta (100%)
4 3820 bp 71.26 1.00 78.22
SCNpilot_cont_300_bf_scaffold_3220_curated
Species: Brevundimonas diminuta (62.5%)
8 9018 bp 71.12 1.00 88.99
SCNpilot_cont_300_bf_scaffold_47019_curated
Species: Brevundimonas sp. BAL3 (50%)
2 1870 bp 70.96 1.00 96.26
SCNpilot_cont_300_bf_scaffold_28428_curated
Species: Hoeflea sp. BAL378 (75%)
4 1763 bp 70.85 1.00 98.53
SCNpilot_cont_300_bf_scaffold_3180_curated
Species: Brevundimonas diminuta (100%)
6 6311 bp 70.81 1.00 95.45
SCNpilot_cont_300_bf_scaffold_13422_curated
Species: Brevundimonas diminuta (100%)
3 2727 bp 70.74 1.00 82.29
SCNpilot_cont_300_bf_scaffold_40228_curated
Species: R_Alphaproteobacteria_66_14 (100%)
2 1401 bp 70.66 1.00 99.36
SCNpilot_cont_300_bf_scaffold_14067_curated
Species: Brevundimonas diminuta (100%)
2 3185 bp 70.61 1.00 87.97
SCNpilot_cont_300_bf_scaffold_6760_curated
Species: Brevundimonas diminuta (100%)
6 4543 bp 70.50 1.00 95.22
SCNpilot_cont_300_bf_scaffold_2835_curated
Species: Brevundimonas diminuta (100%)
11 7181 bp 70.48 1.00 89.28
SCNpilot_cont_300_bf_scaffold_49960_curated
Species: Brevundimonas diminuta (50%)
2 1209 bp 70.39 1.00 80.15
SCNpilot_cont_300_bf_scaffold_4253_curated
Species: Brevundimonas diminuta (100%)
7 5347 bp 70.28 1.00 76.64
SCNpilot_cont_300_bf_scaffold_6332_curated
Species: Brevundimonas diminuta (100%)
5 4214 bp 70.27 1.00 95.68
SCNpilot_cont_300_bf_scaffold_5153_curated
Species: Brevundimonas diminuta (100%)
15 11187 bp 70.07 1.00 88.79
SCNpilot_cont_300_bf_scaffold_3392_curated
Species: Brevundimonas diminuta (100%)
5 6356 bp 70.03 1.00 96.24
SCNpilot_cont_300_bf_scaffold_3312_curated
Species: Brevundimonas diminuta (75%)
8 8677 bp 69.85 1.00 93.45
SCNpilot_cont_300_bf_scaffold_2681_curated
Species: Brevundimonas diminuta (100%)
9 7293 bp 69.85 1.00 91.40
SCNpilot_cont_300_bf_scaffold_47198_curated
Species: R_Brevundimonas_70_19 (100%)
1 1262 bp 69.81 1.00 86.05
SCNpilot_cont_300_bf_scaffold_3607_curated
Species: Brevundimonas diminuta (90.91%)
11 10381 bp 69.80 1.00 93.23
SCNpilot_cont_300_bf_scaffold_46851_curated
Species: Brevundimonas diminuta (100%)
2 1258 bp 69.79 1.00 98.97
SCNpilot_cont_300_bf_scaffold_13061_curated
Species: Brevundimonas diminuta (100%)
10 8945 bp 69.69 1.00 88.44
SCNpilot_cont_300_bf_scaffold_4014_curated
Species: Brevundimonas diminuta (80%)
5 5457 bp 69.64 1.00 94.56
SCNpilot_cont_300_bf_scaffold_1360_curated
Species: Brevundimonas diminuta (100%)
17 15302 bp 69.59 1.00 89.16
SCNpilot_cont_300_bf_scaffold_3053_curated
Species: Brevundimonas diminuta (100%)
10 7414 bp 69.44 1.00 96.14
SCNpilot_cont_300_bf_scaffold_5681_curated
Species: Brevundimonas diminuta (100%)
13 8708 bp 69.41 1.00 98.15
SCNpilot_cont_300_bf_scaffold_24895_curated
Species: Brevundimonas diminuta (100%)
3 1918 bp 69.29 1.00 94.32
SCNpilot_cont_300_bf_scaffold_10678_curated
Species: Brevundimonas diminuta (90%)
10 8750 bp 69.25 1.00 94.87
SCNpilot_cont_300_bf_scaffold_3124_curated
Species: Brevundimonas diminuta (83.33%)
12 7800 bp 69.24 1.00 92.62
SCNpilot_cont_300_bf_scaffold_41519_curated
Order: Caulobacterales (100%)
3 1797 bp 69.23 1.00 98.00
SCNpilot_cont_300_bf_scaffold_8351_curated
Species: Brevundimonas diminuta (87.5%)
8 6798 bp 69.23 1.00 99.56
SCNpilot_cont_300_bf_scaffold_13929_curated
Species: Brevundimonas diminuta (100%)
3 2693 bp 69.14 1.00 92.68
SCNpilot_cont_300_bf_scaffold_33570_curated
Species: Brevundimonas diminuta (100%)
2 1545 bp 69.13 1.00 100.00
SCNpilot_cont_300_bf_scaffold_4681_curated
Species: Brevundimonas diminuta (78.57%)
14 10835 bp 69.04 1.00 79.94
SCNpilot_cont_300_bf_scaffold_8173_curated
Species: Brevundimonas diminuta (100%)
9 4997 bp 69.00 1.00 81.35
SCNpilot_cont_300_bf_scaffold_44099_curated
Species: Brevundimonas diminuta (100%)
2 1261 bp 68.99 1.00 88.50
SCNpilot_cont_300_bf_scaffold_45024_curated
Species: Brevundimonas diminuta (150%)
3 3041 bp 68.99 1.00 77.44
SCNpilot_cont_300_bf_scaffold_29789_curated
Species: Brevundimonas diminuta (100%)
3 1615 bp 68.98 1.00 91.39
SCNpilot_cont_300_bf_scaffold_2576_curated
Species: Brevundimonas diminuta (90.91%)
11 11868 bp 68.96 1.00 91.38
SCNpilot_cont_300_bf_scaffold_2440_curated
Species: Brevundimonas diminuta (93.33%)
15 12107 bp 68.90 1.00 87.05
SCNpilot_cont_300_bf_scaffold_17763_curated
Species: Brevundimonas diminuta (100%)
3 2355 bp 68.87 1.00 86.24
SCNpilot_cont_300_bf_scaffold_9519_curated
Species: Brevundimonas diminuta (88.89%)
9 8055 bp 68.85 1.00 85.40
SCNpilot_cont_300_bf_scaffold_2045_curated
Species: Brevundimonas diminuta (68.75%)
16 11133 bp 68.81 1.00 89.19
SCNpilot_cont_300_bf_scaffold_2750_curated
Species: Brevundimonas diminuta (100%)
14 12883 bp 68.81 1.00 90.86
SCNpilot_cont_300_bf_scaffold_18724_curated
Species: Brevundimonas diminuta (75%)
4 3785 bp 68.80 1.00 89.41
SCNpilot_cont_300_bf_scaffold_4890_curated
Species: Brevundimonas diminuta (63.64%)
11 11007 bp 68.80 1.00 85.69
SCNpilot_cont_300_bf_scaffold_8330_curated
Species: Brevundimonas diminuta (88.89%)
9 6529 bp 68.75 1.00 91.35
SCNpilot_cont_300_bf_scaffold_3743_curated
Species: Brevundimonas diminuta (100%)
9 6479 bp 68.67 1.00 88.81
SCNpilot_cont_300_bf_scaffold_5239_curated
Species: Brevundimonas diminuta (100%)
9 8732 bp 68.61 1.00 85.14
SCNpilot_cont_300_bf_scaffold_8510_curated
Species: Brevundimonas diminuta (100%)
6 5542 bp 68.59 1.00 89.70
Displaying items 1-50 of 418 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.