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scnpilot_p_inoc_scaffold_720_curated_23

Organism: scnpilot_dereplicated_Burkholderiales_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 20264..20908

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YD4_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 212.0
  • Bit_score: 287
  • Evalue 8.60e-75
two component LuxR family transcriptional regulator; K11712 two-component system, LuxR family, response regulator DctR similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 212.0
  • Bit_score: 287
  • Evalue 2.70e-75
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 214.0
  • Bit_score: 312
  • Evalue 4.60e-82

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Taxonomy

RLO_Burkholderiales_61_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGCACCCTGTCTCCATCCATATCGTCGACGATGACCGCGACATCCGCGAAGGCTTGGCCTGGCTGTTCGATTCGCGCGGCTACCGCGCCGCCACGTGGGAAAACGGCAAGGTGTTCCTGGACGAGGCCGCGCACCTACAGCGCGCCTGGGGCACGGCCGTGGTGCTCATGGACATCCGCATGGAACCGCTGTCGGGCCTGAGCACCTATGAGCAGCTGGTGCAATTGGGCTGCCCCTGGCCCGTGCTGTTCCTGACGGGCCACGGGGACGTGAGCATGGCGGTGGCGGCCGTCAAGCGCGGCGCGTGGGACTTTCTGGAAAAGCCCTTTCAAGACAACATGCTGGTCGACCGCGTGGAGCAGGCGCTGGCCGCGACCACCGCGCAGCAGCAGGCGAGCGAGCGCGACAGCGCGCTGCGCGAAGCGCTGGCCGGGCTGAGCCACCGCGAGCGCGAGGTGCTCGATGAGCTGCTGCACGGCCACTACAACAAGACCATTGCCGATCACCTGGGCATCACCCAGCGCACAGTGGAGTTCCACCGCGCCAACATCTTTTCCAAGCTGGGGGTGCGCTCGGCGATCGAGCTGGCGCACCAATTGGGCCGACTGCAGTCGCTGCCGCCACCGCCGCCCGCGGAGCCGTAG
PROTEIN sequence
Length: 215
MHPVSIHIVDDDRDIREGLAWLFDSRGYRAATWENGKVFLDEAAHLQRAWGTAVVLMDIRMEPLSGLSTYEQLVQLGCPWPVLFLTGHGDVSMAVAAVKRGAWDFLEKPFQDNMLVDRVEQALAATTAQQQASERDSALREALAGLSHREREVLDELLHGHYNKTIADHLGITQRTVEFHRANIFSKLGVRSAIELAHQLGRLQSLPPPPPAEP*