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scnpilot_p_inoc_scaffold_3638_curated_1

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 3..356

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RA55_CLOSW similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 109.0
  • Bit_score: 171
  • Evalue 6.40e-40
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 109.0
  • Bit_score: 171
  • Evalue 2.00e-40
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADL06027.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 109.0
  • Bit_score: 171
  • Evalue 9.00e-40

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Taxonomy

[Clostridium] saccharolyticum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 354
GCCGTCAAAACCATCGACAGCCTGCGCGTACTCAGCCTGTCGCACATCGTTTGCTGCGAATACAGCAACCATGCCGTGATCTTCAGCCTCACGCATGGCGAGAAGCTGTGCAGCCGCACCTTCAGGGAAAACTTCTCGGACTACTGTGCGCCCATCTTGCGGGAAGGGCATTTTCTGCAGTGCCACGCCGCATTCGTGATCAACATGCGCCGGGTTGAACGCTTTGCCAAGGACAGTTTCACGCTTTGCGGCGGAAAAACCGTTCCCATTGCGCCCAAGCGGTACGCCGCCGTGCGGGATGCCTATATGGACTACCTGATGGCAAGAATGGGCGACCGGGGAAAAACCGGATGA
PROTEIN sequence
Length: 118
AVKTIDSLRVLSLSHIVCCEYSNHAVIFSLTHGEKLCSRTFRENFSDYCAPILREGHFLQCHAAFVINMRRVERFAKDSFTLCGGKTVPIAPKRYAAVRDAYMDYLMARMGDRGKTG*