ggKbase home page

scnpilot_p_inoc_scaffold_1607_curated_15

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(16170..16589)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4 domain protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q3Z2_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 139.0
  • Bit_score: 237
  • Evalue 6.60e-60
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15 similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 139.0
  • Bit_score: 237
  • Evalue 2.10e-60
RNA-binding S4 domain protein {ECO:0000313|EMBL:ADX46701.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 139.0
  • Bit_score: 237
  • Evalue 9.30e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGACCCCGCCGGACTCCATGCGCATCGACAAATGGCTGTGGTGCGCACGCTTCTACAAGACGCGCACGCTCGCCGCCGAGGAGATCGGCAAGGGGCGCGTGGGCATCAACGGCCAGCCGGCCAAGCCCGCGCGCGAGGTGCGCCCCGGCGACACGGTGACCCTGCGCCAGGGCTCTGTGCAGCGCACCGTGGTGGTGCGCGCGCTCAGCGCGCAGCGCGGCCCGGCCCCGGTGGCCCAGCAGCTCTACGAGGAGACGGCCGACAGCATCGCCGCACGCGAGCAGGCCCAGGAAATGCGCCGCCTGGCCCCCGAGCCCGCCGCCGCGCTGGCCGAGGGCCGGCCGACCAAGCGAGACCGCCGCCACATCGACCGCGCGCGCGACTGGGGCAGCCGCTGGAGCGCATCCATCGACGACTGA
PROTEIN sequence
Length: 140
MTPPDSMRIDKWLWCARFYKTRTLAAEEIGKGRVGINGQPAKPAREVRPGDTVTLRQGSVQRTVVVRALSAQRGPAPVAQQLYEETADSIAAREQAQEMRRLAPEPAAALAEGRPTKRDRRHIDRARDWGSRWSASIDD*