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SCNpilot_bf_inoc_scaffold_535_curated_27

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(28660..29274)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J3CUU9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 202.0
  • Bit_score: 324
  • Evalue 7.90e-86
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL78974.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 202.0
  • Bit_score: 324
  • Evalue 1.10e-85
putative ABC transporter, branched-chain amino acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 200.0
  • Bit_score: 323
  • Evalue 4.20e-86

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
GTGCTGCGCGGCGCCGAGGATGGCCTGAAGACCATCGGCATGGAACTGGCCGAGAAGACCAGCTACAAGCGTGGCGCCACCGACTTCTCCTCGCAGGTGGCCAAGATGAAGGCCGCCGGCTGCGATTTCGTGGTGCTGGGCACGGTGATTCGCGAGACCATCGGCACCATTGCCGAGTCGCGCAAGACCGGCTTCAGCCCCACCTTCCTGGGCACCACGGCCGCTTACACCGATCTGGTCCACAAGCTGGGCGGCAAGGCCATGGACGGCTTGTACGCCACCATGGCGGTGCAGGTGCCGTATCTGGACGAGGCCTCGCAGCCGATCCGCTTCTGGGCCAACAAGTACAAGACCAAGTTCAACGAGGATCCCGGCGTGTTCTCGGTCTACGGCTATGAAATCATGGACAACTTCATCCAGGGCGCGCAGCGTGCCGGTGCCAACCTGAGCACCGACAGCTTCATCAAGGCCATGGACAGCGCGGCGATCCAGCCCGACATGTTCGGCAGCGACATCATGAAGTTCAGCGCCACCAACCGGCTGGGCACGGATCGCTCGCGCCTGTCGCAGATCCAGGACGGCCGCTGGAAGGTGGTGTCGGACTACTTCAAGTAA
PROTEIN sequence
Length: 205
VLRGAEDGLKTIGMELAEKTSYKRGATDFSSQVAKMKAAGCDFVVLGTVIRETIGTIAESRKTGFSPTFLGTTAAYTDLVHKLGGKAMDGLYATMAVQVPYLDEASQPIRFWANKYKTKFNEDPGVFSVYGYEIMDNFIQGAQRAGANLSTDSFIKAMDSAAIQPDMFGSDIMKFSATNRLGTDRSRLSQIQDGRWKVVSDYFK*