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SCNpilot_expt_1000_bf_scaffold_988_curated_51

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 53917..54618

Top 3 Functional Annotations

Value Algorithm Source
lpsI; 3-oxoacid CoA-transferase subunit A (EC:2.8.3.5); K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 229.0
  • Bit_score: 406
  • Evalue 7.40e-111
3-oxoacid CoA-transferase subunit A {ECO:0000313|EMBL:CAP42128.1}; EC=2.8.3.5 {ECO:0000313|EMBL:CAP42128.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 229.0
  • Bit_score: 406
  • Evalue 3.30e-110
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036EAFC3 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 232.0
  • Bit_score: 406
  • Evalue 1.40e-110

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGAACAAGAAGGTGTATCCCAGCGCCGCCGCGGCGCTGGCAGGCGTGGTTGCAGACGGCCAGATGATCGCGGTCGGCGGCTTCGGCCTGTGCGGCATTCCGGAAGCGCTCATCGCGGCGCTGCGCGACTCCGGCGTGCGCAACCTCACCTGCGTCTCGAACAATGCGGGCGTCGACGGCTTCGGGCTCGGGCAGCTGCTCGCCACGCGCCAGATCCGCAAGATGATCGCCTCGTACGTGGGCGAGAACAAGGAGTTCGAGCGCCAGTACCTCGCCGGCGAGCTCGAGCTCGAGTTCACCCCGCAGGGCACGCTGGCCGAGAAGCTGCGTGCCGGGGGCGCCGGCATCCCGGCGTTCTTCACCCGCACCGGCGTGGGCACCATCGTCGCCGAAGGCAAGGAAGTGCGCGAGTTCGACGGCCATACCTACGTCATGGAGCGCTCGCTGGTTCCCGACGTCTCGCTGATCAAGGCGTGGATGGCCGATCGCGCCGGCAACCTGGTGTTCCGCCGCACCGCGCGCAACTTCAATCCCAACGTCGCCATGGCCGGCCGCGTCACGGTGGCCGAGGTCGAGGTGATCGTGCCCACCGGCGAGATCGACCCCGACCAGGTCCACCTGCCGGGCATCTACGTGCACCGCATCGTGCACAACCCCACCCCCGAGAAGCGCATCGAGCAGCGCACGACGCGGCCGCGATAA
PROTEIN sequence
Length: 234
MNKKVYPSAAAALAGVVADGQMIAVGGFGLCGIPEALIAALRDSGVRNLTCVSNNAGVDGFGLGQLLATRQIRKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFTRTGVGTIVAEGKEVREFDGHTYVMERSLVPDVSLIKAWMADRAGNLVFRRTARNFNPNVAMAGRVTVAEVEVIVPTGEIDPDQVHLPGIYVHRIVHNPTPEKRIEQRTTRPR*