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SCNpilot_expt_1000_bf_scaffold_284_curated_3

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1706..2659)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TL98_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 317.0
  • Bit_score: 510
  • Evalue 9.20e-142
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 317.0
  • Bit_score: 510
  • Evalue 2.90e-142
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADV11522.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 317.0
  • Bit_score: 510
  • Evalue 1.30e-141

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Taxonomy

Mesorhizobium ciceri → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGGTCATCAAGCGCATATCGGGCCGACCGATGCCGAGTTGGCCATTGCCGCTCGTGCCGGCGACTGTGGCTGCCTCGGGCTGCTTCTGGAACGCCATCGCGCGCGGCTGTACGCGGCGGCATTGAGGGTGCTCGGCTACGGCCCGGAAGCCGAGGATGCCGTCCATGACACGTTTCTCATCGCGCTGAAGCGCATCGGCGACCTCGAGGACCCACAGGCAGTCGTCGGCTGGCTTCACGCCGTGCTGCACCGCTGCTGCCTGCGGCAATTGCGCCGTGGACGGCGCGAGGTGCTGGTCGCGGAGATTCCCGATCGCCCCGACGAACGGCCCGGCGTCGAGGAGCGGCTGGAAAAGGCTGCACTGCGCGAATGGGTCTGGGACGCACTGCGAAAACTTCCCGAGCCGCTGCAGGCCACCGCCATGCTGCGCTACTTCGGCAGCTATCCCTCGTACGAGGAGCTGGCCGCCATCCTGGCGATTCCGATCGGGACGGTCCGCAGCCGCCTGTCGGAGGCCAAGCGCAAGCTGGCCGAGATGCTGCTCGAGACGGCAGGCCTCGTCGATTCCGACGCCAGGTTGCGATCGCTCGAGCGCCGGCGGTTCTATGAAGAGGTCTTTCGCGGCCTCGGCCGCCCTGGCGAGCGCGAGCGCTGCCTCGACCATTTCGCAGAGGACCTTCATCTCGTCCGCGGAGCGGCCAAGCCGGTATTCGGGCGGTCATTCGTCGCCCGGGAGGTCATCGAGGACGCTGAAGCCGGCGTCATCCTCGAACCGCAGCGCATCCTCGGCGCCGGCCAAGTCGTGGTGATCGAGGGACGCTTCGTCAATCCGCCCGAGGATCCGTTCCATTGCCCGCCCGGCGTCGCATTCGTGGTCTTTCAGCGCAACGGCAAGGTCGGCCGTCTGCATATCCACCTGTCGCCGCGTCCGCCCAGAATCGACGACGACTGA
PROTEIN sequence
Length: 318
MGHQAHIGPTDAELAIAARAGDCGCLGLLLERHRARLYAAALRVLGYGPEAEDAVHDTFLIALKRIGDLEDPQAVVGWLHAVLHRCCLRQLRRGRREVLVAEIPDRPDERPGVEERLEKAALREWVWDALRKLPEPLQATAMLRYFGSYPSYEELAAILAIPIGTVRSRLSEAKRKLAEMLLETAGLVDSDARLRSLERRRFYEEVFRGLGRPGERERCLDHFAEDLHLVRGAAKPVFGRSFVAREVIEDAEAGVILEPQRILGAGQVVVIEGRFVNPPEDPFHCPPGVAFVVFQRNGKVGRLHIHLSPRPPRIDDD*