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SCNpilot_expt_1000_bf_scaffold_579_curated_5

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 5716..6174

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y805_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 107.0
  • Bit_score: 187
  • Evalue 1.10e-44
ABC-2 type transporter; K01992 ABC-2 type transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 107.0
  • Bit_score: 187
  • Evalue 3.50e-45
ABC-2 type transporter {ECO:0000313|EMBL:ACB33747.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 107.0
  • Bit_score: 187
  • Evalue 1.60e-44

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGATCGAGGCGCGACAAGTCCTGGCCGTCGCAGCCAAGGAGTTCCGCGACCGCCTGCGCAACCGCTGGGTGCTGGCGGTGGCGCTGGTATTCGCGGTGTTCTCGCTCGTCATCACCTATGCCGGCGGCGCGCAGCAGGGTGCGGTGGGGCTGCGCTCGCTCGAGTTCACGATCGCCAGCCTGGTCAGCCTGGTGATCTACCTGGTGCCGCTGATCGCGCTGCTGCTCGGCTTCGACGCCATCGTCGGCGAGCGCGAGCGCGGCTCGCTCGACCTGCTGCTCGCGCTGCCGCTCACGCGCACCGAGCTGCTGCTCGGCAAGTACCNNNNNNNNNNNNNNTGGCGCTGGTCGGCGGCGTGCTGGCGCGCAGGTTCGGCGGCGATGCGCTGTACCACTACGGCGGTTTCGTGCTCAGCGCGGTGCTGCTCGGGCTCGCCTTCCTCAGCCTGGCGGTGCTGA
PROTEIN sequence
Length: 153
MIEARQVLAVAAKEFRDRLRNRWVLAVALVFAVFSLVITYAGGAQQGAVGLRSLEFTIASLVSLVIYLVPLIALLLGFDAIVGERERGSLDLLLALPLTRTELLLGKYXXXXXWRWSAACWRAGSAAMRCTTTAVSCSARCCSGSPSSAWRC*