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SCNpilot_expt_1000_bf_scaffold_1924_curated_3

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(2545..3372)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000372506B similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 161.0
  • Bit_score: 167
  • Evalue 1.70e-38
ClpXP protease specificity-enhancing factor {ECO:0000313|EMBL:EDM85144.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 190.0
  • Bit_score: 167
  • Evalue 3.00e-38
ClpXP protease specificity-enhancing factor; K03600 stringent starvation protein B similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 193.0
  • Bit_score: 165
  • Evalue 2.60e-38

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Taxonomy

Limnobacter sp. MED105 → Limnobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGGCCGAGATTTCCACCAAGCCGTACCTGATCCGCGCGCTCTACGAGTGGTGCGCGGACAACGGCTACCGGCCCTACATCGCCGTGGCGGTCGACGAGCGTACGGTCGTGCCGCGCGAGTTCGTGCGCAACGGCGAGATCGTGCTGAACATCTCGGCCGTGGCCACCAACCGGCTCACCATCGGCAACGAGCTGCTCGAGTTCGAGGCGCGCTTCGGCGGGGTGGCGCGCCAGGTGTCGATCCCGATCGAGAACATCTCGGCCATCTTCGCGCAGGAGAACGGCCACGGCATGGCGTTCGAGGTGCACAGGCCGCCGGCCGACGAAGCACCTCCGCACGAGGAAGCCGCCGGCGCGCCGGCGCGCGCACCCAGCCTCGCCGCCGTGCCCCGGGAAGCGCCGGCCGCGCCTTCCGGCGCAGGGGCCGTGCCGGAAGGCGACGCCCCCGCGTCGCGCGCAGCGCCCGGCGCGCAGCCGCGCGCGAGCGAGCCGGCCTCCTCTTCCGATGCCGCCTCGCCTTCCGATAGCGCCGCGCCGCAGCCGCCGGCGCGCGCACGCCGGCGGCCGAAGCTGGCTAGCGTGCCCGCCCCGGACGCCGGGCCGGCCAAGCCGCCCCGGCGCAAGGCGCCGATCGCGGCCGTGCCCTCGGCACCGGCTCGCTCGCCGGCCTCGGCGCGCGATGATGCCGCGGCGCCGGCACCGGGCCATGCGCCCGCAGAGGCAGCCCCGGGGACGCAGCCTCCCGCGGGCTCCGGAACGCCTCCCGGCGGCGACGAGCCCAGCCCGCCGACACCCCCCGGCAGGCCGCACCTGAAGCGTGTGAAGTAG
PROTEIN sequence
Length: 276
MAEISTKPYLIRALYEWCADNGYRPYIAVAVDERTVVPREFVRNGEIVLNISAVATNRLTIGNELLEFEARFGGVARQVSIPIENISAIFAQENGHGMAFEVHRPPADEAPPHEEAAGAPARAPSLAAVPREAPAAPSGAGAVPEGDAPASRAAPGAQPRASEPASSSDAASPSDSAAPQPPARARRRPKLASVPAPDAGPAKPPRRKAPIAAVPSAPARSPASARDDAAAPAPGHAPAEAAPGTQPPAGSGTPPGGDEPSPPTPPGRPHLKRVK*