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SCNpilot_expt_500_p_scaffold_614_curated_28

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 26243..26602

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B77AD3 similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 117.0
  • Bit_score: 182
  • Evalue 2.20e-43
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 119.0
  • Bit_score: 229
  • Evalue 2.80e-57
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 119.0
  • Bit_score: 179
  • Evalue 5.80e-43

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCCCGTGTAAAAAGAGGGACAACAACCCACGCTCGACATAAAAAAATTATTAAGATGGCTTCTGGCTATTTTGGCCGTCGCAAAAATTGTTATCGCACAGCTATTCAAGCCGTTGAAAAAGGACTTCAATATGCTTATCGCGATCGCCGTACGCGCAAACGCAATTTCCGTGCTCTATGGATTCAGAGGATTAATGCTGCTGCACGTCAATTCGGCCTTACATATTCACAATTCATGAACGGTGTTCATAAAGCTGGAATTGAAGTTGATCGCAAAGTTTTAGCTGATCTGGCTGCTCGTGAACCTCAAGCTTTTGAAGCGATTGTAAATCAAGCAACTAAAGCTTTAGCCGCTTAA
PROTEIN sequence
Length: 120
MARVKRGTTTHARHKKIIKMASGYFGRRKNCYRTAIQAVEKGLQYAYRDRRTRKRNFRALWIQRINAAARQFGLTYSQFMNGVHKAGIEVDRKVLADLAAREPQAFEAIVNQATKALAA*