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SCNpilot_expt_500_p_scaffold_614_curated

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_614_curated_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124..426)
DNA (303bp) protein (101aa)
ETC complex I subunit n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SF14_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AIL12964.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ETC complex I subunit
SCNpilot_expt_500_p_scaffold_614_curated_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(439..2373)
DNA (1935bp) protein (645aa)
Aminopeptidase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SPT3_9BACT
Peptidase S9 {ECO:0000313|EMBL:AIL12965.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Putative aminopeptidase
SCNpilot_expt_500_p_scaffold_614_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2597..3871
DNA (1275bp) protein (425aa)
major facilitator transporter n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BAFE
Uncharacterized protein {ECO:0000313|EMBL:AIL12967.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative major facilitator superfamily protein
SCNpilot_expt_500_p_scaffold_614_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3948..4361)
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12968.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_614_curated_5
unknown

Not on your lists

4505..4999
DNA (495bp) protein (165aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_614_curated_6
Pseudomonas kilonensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4992..5783)
DNA (792bp) protein (264aa)
alpha/beta hydrolase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000348C0DF
Alpha/beta hydrolase {ECO:0000313|EMBL:KKA07533.1}; TaxID=132476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas kilonensis.;"
alpha/beta hydrolase
SCNpilot_expt_500_p_scaffold_614_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5808..7721)
DNA (1914bp) protein (638aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthetase n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IYJ4_NOSP7
Uncharacterized protein {ECO:0000313|EMBL:AIL12970.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_614_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7777..8433)
DNA (657bp) protein (219aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B709
SCNpilot_expt_500_p_scaffold_614_curated_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8443..10023)
DNA (1581bp) protein (527aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000313|EMBL:KJB95608.1}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EXI8_9BACT
cutE; apolipoprotein N-acyltransferase
SCNpilot_expt_500_p_scaffold_614_curated_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10020..10847)
DNA (828bp) protein (276aa)
Magnesium and cobalt efflux protein CorC n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GSI2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL12972.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
magnesium and cobalt efflux protein corC
SCNpilot_expt_500_p_scaffold_614_curated_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10840..11334)
DNA (495bp) protein (165aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Endoribonuclease YbeY n=1 Tax=Bartonella schoenbuchensis m07a RepID=N6VH98_9RHIZ
hypothetical protein; K07042 probable rRNA maturation factor
SCNpilot_expt_500_p_scaffold_614_curated_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11365..12324)
DNA (960bp) protein (320aa)
PhoH-like protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVM1_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:AIL12974.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
PhoH-like protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
SCNpilot_expt_500_p_scaffold_614_curated_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12357..13697)
DNA (1341bp) protein (447aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=uncultured bacterium RepID=K2EIX5_9BACT
miaB; isopentenyl-adenosine A37 tRNA methylthiolase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
SCNpilot_expt_500_p_scaffold_614_curated_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13865..14305)
DNA (441bp) protein (147aa)
MucR family transcriptional regulator n=1 Tax=Elioraea tepidiphila RepID=UPI0003683BA9
MucR family transcriptional regulator {ECO:0000313|EMBL:AIL12976.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ROS/MUCR transcriptional regulator family protein
SCNpilot_expt_500_p_scaffold_614_curated_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14458..14931)
DNA (474bp) protein (158aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U101_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AIL12977.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ribosomal-protein-alanine N-acetyltransferase protein
SCNpilot_expt_500_p_scaffold_614_curated_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14931..15578)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000367B686
Uncharacterized protein {ECO:0000313|EMBL:AIL12978.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
infB; translation initiation factor IF-2
SCNpilot_expt_500_p_scaffold_614_curated_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15794..16159)
DNA (366bp) protein (122aa)
RNP-1 like RNA-binding protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LED5_SYNFM
Uncharacterized protein {ECO:0000313|EMBL:AIL12825.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
RNP-1 like RNA-binding protein
SCNpilot_expt_500_p_scaffold_614_curated_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16572..17351
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002F2AE5D
Uncharacterized protein {ECO:0000313|EMBL:AIL12994.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family
SCNpilot_expt_500_p_scaffold_614_curated_19
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17359..17730)
DNA (372bp) protein (124aa)
ribose-5-phosphate isomerase (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
galactose isomerase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C76EE
Putative ribose/galactose isomerase {ECO:0000313|EMBL:CEG56121.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
SCNpilot_expt_500_p_scaffold_614_curated_20
GWF2_Alphaproteobacteria_58_20_curated, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17746..19080)
DNA (1335bp) protein (445aa)
GTPase HflX n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZL0_9PROT
GTPase; K03665 GTP-binding protein HflX
Tax=GWF2_Alphaproteobacteria_58_20_curated
SCNpilot_expt_500_p_scaffold_614_curated_21
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19095..19346)
DNA (252bp) protein (84aa)
RNA-binding protein Hfq n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLA0_TISMK
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
RNA-binding protein Hfq
SCNpilot_expt_500_p_scaffold_614_curated_22
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20333..20872)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SRU2_RHOPH
Cytoplasmic protein {ECO:0000313|EMBL:AIL12996.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_614_curated_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20971..22056)
DNA (1086bp) protein (362aa)
pfk; 6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase n=1 Tax=uncultured bacterium RepID=K2EX31_9BACT
6-phosphofructokinase {ECO:0000313|EMBL:AIL12997.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_614_curated_24
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22188..22388
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJ90_9PROT
Small protein containing a coiled-coil domain containing protein {ECO:0000313|EMBL:AIL12998.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_614_curated_25
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22625..24166)
DNA (1542bp) protein (514aa)
Patatin n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q1E8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AIL12999.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
patatin family protein
SCNpilot_expt_500_p_scaffold_614_curated_26
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24430..25716)
DNA (1287bp) protein (429aa)
Patatin n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9PVH6_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AIL13377.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
patatin
SCNpilot_expt_500_p_scaffold_614_curated_27
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


26027..26230
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000381072B
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
50S ribosomal protein L35
SCNpilot_expt_500_p_scaffold_614_curated_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


26243..26602
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B77AD3
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
SCNpilot_expt_500_p_scaffold_614_curated_29
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26933..27844
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A9EF
Uncharacterized protein {ECO:0000313|EMBL:AIL13002.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transcriptional regulator
SCNpilot_expt_500_p_scaffold_614_curated_30
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27932..28498
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13003.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein id=11410 bin=ACD17 species=ACD17 genus=ACD17 taxon_order=ACD17 taxon_class=ACD17 phylum=Clamydiae tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6
Displaying items 1-30 of 35 in total

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