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SCNpilot_expt_500_p_scaffold_614_curated_21

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(19095..19346)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLA0_TISMK similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 77.0
  • Bit_score: 134
  • Evalue 4.70e-29
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 83.0
  • Bit_score: 168
  • Evalue 5.40e-39
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 77.0
  • Bit_score: 134
  • Evalue 1.50e-29

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGATTTCGGATAAGGTAAGTAATTTGCAAGATACGTTTTTGAATCATTTACGTAAGAATAAAAATCCTGTAACTTTATTTCTTGTAAATGGTGTAAAGTTACAAGGTATCATTACGTGGTTTGATAATTTTTCAGTTTTGTTAAGAAGAGACGCACACTCTCAACTTGTCTATAAACACGCAATATCAACAATAATGCCGACTAATCCAGTGCAATTATTCGATGCAGAGAATGTAGATAACGAAGGTTAA
PROTEIN sequence
Length: 84
MISDKVSNLQDTFLNHLRKNKNPVTLFLVNGVKLQGIITWFDNFSVLLRRDAHSQLVYKHAISTIMPTNPVQLFDAENVDNEG*