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SCNpilot_expt_500_p_scaffold_643_curated_22

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(21430..22353)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 307.0
  • Bit_score: 471
  • Evalue 8.40e-130
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 311.0
  • Bit_score: 229
  • Evalue 1.20e-57
Pseudouridine synthase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K8J4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 314.0
  • Bit_score: 239
  • Evalue 5.00e-60

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGGCGATTCAAAAAGTAATAATTTCTAAAAATGATGCAGGGATAAAGTTATTAAGTTGGTTAAAGAATTACTACCAAGGTATGCCCTTTAATCAATTACAGAAATGGTTAAGAACTGGACAAATTCGTGTTAATGGAAAACGGGTGAAAGGAAGTGAGATCTTAGTTTTGAGCCAAGAACTTAGATTACCTTCTTACACTTCGGATTTTAAGAGAAATAATTTCCTAAAAAAGCATGAGCCAAAACCTGAGAGGTTAAAACAAGTACAAGAAGCCATTATTTATCAAAATGAGCGTTGGATCGTTCTTAATAAGCCACAAGGACTTGCAACACAAGGTGGAACAGGAATTAAAGAAAGCGTTGATCAACTCATGGAAATCCTATTTACGCCTTCACCTAAGCTTACCCATCGCCTTGATAAAGATACCAGTGGTCTTCTTTTGCTAGCAAAGACACTTGAGGATGCGCGTTGGATCACACAAATGTTTAAAGAAGGAACTGTTTCTAAGACTTATATCGCAGTTGTTGTTGGGGTGTTACCTGCTTTAATAGGAGAGATTAATTTACCAATATGCAAGCTTCCAGGAAAGGCAGGAGAACGTATGGTTGTTGATTTTAATGAAGGCTTAGAAGCAATAACATCTTATCGTGTTCTTGAAACGAAGGATAATTTGTCCTTGCTTGAACTAAAACCAAAGACAGGAAGAATGCATCAGTTGCGTCTTCATTGTGCAGAACTCGGCACCCCAATTTTGGGAGATGGTAAATATGGTGGAAAGAGAGCTCATTTGGATGGCCTACGCTTTATGCTTCATCTTCATGCATCTCAAATTGAATTTAAAGATCCTCAAGGAAGAACATGGGCTTTTAAAGCAGATCTTCCTCAACATATGATAAAAACTTTGAAAGAATTTAAACTTTAA
PROTEIN sequence
Length: 308
MAIQKVIISKNDAGIKLLSWLKNYYQGMPFNQLQKWLRTGQIRVNGKRVKGSEILVLSQELRLPSYTSDFKRNNFLKKHEPKPERLKQVQEAIIYQNERWIVLNKPQGLATQGGTGIKESVDQLMEILFTPSPKLTHRLDKDTSGLLLLAKTLEDARWITQMFKEGTVSKTYIAVVVGVLPALIGEINLPICKLPGKAGERMVVDFNEGLEAITSYRVLETKDNLSLLELKPKTGRMHQLRLHCAELGTPILGDGKYGGKRAHLDGLRFMLHLHASQIEFKDPQGRTWAFKADLPQHMIKTLKEFKL*