ggKbase home page

SCNpilot_expt_500_p_scaffold_4107_curated_11

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(9231..9800)

Top 3 Functional Annotations

Value Algorithm Source
putative F pilus assembly protein traE n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACDD similarity UNIREF
DB: UNIREF100
  • Identity: 36.9
  • Coverage: 179.0
  • Bit_score: 119
  • Evalue 2.70e-24
Uncharacterized protein {ECO:0000313|EMBL:AIL12624.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 189.0
  • Bit_score: 335
  • Evalue 5.80e-89
traE; F pilus assembly protein traE; K12067 conjugal transfer pilus assembly protein TraE similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 178.0
  • Bit_score: 95
  • Evalue 2.30e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGAAAAAAAAGCTCCAACACTTAAGACTTCATGATCTCTTGAGGCATAGGAACTACCTAACCTTTATAGGCTTTGGGCTTCTTGCGTCAAACTTGCTCATGACCTTTGCTCTTTGCACGCAGAGTGAACGCGTTGTGCTTGTGCCCCCTCATTTAACAGGATCTGCGTGGGTCGAACGCAGCAAAGTCTCACCCCAATATCTTGAAGAAATGGCACTGTTCTTTGGAAGCATTCTTTTAAACAAGACGCCCCAGAGTGCACCTTATCTTCATGAACTCGTTCTTCGATATGCAGACTCACGCGGGATTGGCAATCTTAAGCACAAGCTTCGAGAAGAAGAAGAGAGATACCAAAAAAGCGGCCTTAGCACCTCCTTTTATCCCAAAAAGGTCGTTGTTCAGGAAAAAGGTCTGCAAGTTGATCTTGTTGGGGAGATGGTCGGCTATGTCAGCCAAAAATGCATTTTCCAGAAGGAAGAAACCTACCGCATGACCTTTACTTATGATCATGGGCGTTTGCTTATCAGCTCCTTTGAACATCTGACAGGAAAGGAGCAAAGCCATGCGTAA
PROTEIN sequence
Length: 190
MKKKLQHLRLHDLLRHRNYLTFIGFGLLASNLLMTFALCTQSERVVLVPPHLTGSAWVERSKVSPQYLEEMALFFGSILLNKTPQSAPYLHELVLRYADSRGIGNLKHKLREEEERYQKSGLSTSFYPKKVVVQEKGLQVDLVGEMVGYVSQKCIFQKEETYRMTFTYDHGRLLISSFEHLTGKEQSHA*