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SCNpilot_expt_500_p_scaffold_2373_curated_3

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1838..2524

Top 3 Functional Annotations

Value Algorithm Source
UPF0758 protein pc1765 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Y1765_PARUW similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 227.0
  • Bit_score: 228
  • Evalue 8.60e-57
DNA repair protein RadC {ECO:0000313|EMBL:CDZ80524.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 228.0
  • Bit_score: 444
  • Evalue 8.20e-122
radC; DNA repair protein radC; K03630 DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 227.0
  • Bit_score: 228
  • Evalue 2.70e-57

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Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 687
ATGAAATATAGCTTACTTTCTTTGCCCATTGAAGATAGACCTCGAGAACGATTTCTAAAATTTGGTCCTGAGGTAATGCAAACAGCTGAGCTAATCGCCATTATTTTAGGTACAGGTACAAAAGATTTTTCAGTGATGGAAATTTCTGAATTGCTCATTAGTCATTTTCAAACACTTGAACAACTAGCGCAAGCAACCGTTTCTGAATTAATGGCAATCAAAGGCGTTGGTAAAGCTAAAGCTTTGCAAATAAATGCTGTGTTTGCTCTTGCTAAAAGAATGACCCAACAAGGTGTTCATTTTAGACAAAAAATCGAACACCCTATCCATGTTTTTCGACTTTTTAAAAATAAATTTTTTTCTGAAAAAAGAGAATGTTTCTATGCTATTTATTTAGATAATAAAGGATATATTTTAAAAGAAATGCTCATATCGATTGGAACTTTAACAGAAACTTTAGTTCATCCACGTGAAGTTTTTTATCCAGCGATACGTCATCAAGCTTCCAGCGTTATCCTTATTCATAACCACCCAAGTGGAGAAGTACAACCATCCATTGAGGATATTGAAACAACAAAAACCTTAATAAAAACAGGGCAAATAATTGGGATAGAGGTTCAAGATCATTTAATTATCGGTAATAATTGTTTTTTTTCTTTTAAAGAAAAATCTTTGCTTTTTAACTAA
PROTEIN sequence
Length: 229
MKYSLLSLPIEDRPRERFLKFGPEVMQTAELIAIILGTGTKDFSVMEISELLISHFQTLEQLAQATVSELMAIKGVGKAKALQINAVFALAKRMTQQGVHFRQKIEHPIHVFRLFKNKFFSEKRECFYAIYLDNKGYILKEMLISIGTLTETLVHPREVFYPAIRHQASSVILIHNHPSGEVQPSIEDIETTKTLIKTGQIIGIEVQDHLIIGNNCFFSFKEKSLLFN*