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SCNpilot_expt_500_p_scaffold_2373_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2373_curated_1
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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3..518
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5A8_9CHLA
Putative hydrolase {ECO:0000313|EMBL:CDZ80522.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
lipB; metal dependent hydrolase of the beta-lactamase superfamily I; K06167 PhnP protein
SCNpilot_expt_500_p_scaffold_2373_curated_2
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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525..1841
DNA (1317bp) protein (439aa)
GTPase HflX n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MAA9_PARUW
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K03665 GTP-binding protein HflX rbh
SCNpilot_expt_500_p_scaffold_2373_curated_3
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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1838..2524
DNA (687bp) protein (229aa)
UPF0758 protein pc1765 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Y1765_PARUW
DNA repair protein RadC {ECO:0000313|EMBL:CDZ80524.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
radC; DNA repair protein radC; K03630 DNA repair protein RadC
SCNpilot_expt_500_p_scaffold_2373_curated_4
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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2640..3905
DNA (1266bp) protein (422aa)
Putative methylthiotransferase CPn_0477/CP_0277/CPj0477/CpB0496 n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L089_PARAV
Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB {ECO:0000313|EMBL:CDZ80525.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
methylthiotransferase
SCNpilot_expt_500_p_scaffold_2373_curated_5
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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3906..4916
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7A5_9CHLA
Uncharacterized protein {ECO:0000313|EMBL:CDZ80526.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2373_curated_6
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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4933..7092
DNA (2160bp) protein (720aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
glgB; 1,4-alpha-glucan-branching protein; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L091_PARAV
SCNpilot_expt_500_p_scaffold_2373_curated_7
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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7195..9195
DNA (2001bp) protein (667aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
ligA; DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R586_9CHLA
SCNpilot_expt_500_p_scaffold_2373_curated_8
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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9302..9862
DNA (561bp) protein (187aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
sodC; superoxide dismutase (Cu-Zn); K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1]
Superoxide dismutase [Cu-Zn] n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MAB6_PARUW
SCNpilot_expt_500_p_scaffold_2373_curated_9
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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9991..10482
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80530.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_2373_curated_10
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(10504..11823)
DNA (1320bp) protein (440aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=MIAB_PARUW rbh
miaB; 2-methylthioadenine synthetase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA rbh
Displaying 10 items

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