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SCNpilot_bf_inoc_scaffold_67_curated_78

Organism: scnpilot_dereplicated_Clostridiales_1

near complete RP 49 / 55 MC: 5 BSCG 51 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: comp(81610..83478)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 621.0
  • Bit_score: 653
  • Evalue 4.10e-184
deoxyxylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 602.0
  • Bit_score: 643
  • Evalue 7.30e-182
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VQL8_CLOBI similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 621.0
  • Bit_score: 653
  • Evalue 2.90e-184

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Taxonomy

[Clostridium] bifermentans → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1869
ATGGAGAAAGGAACGGCTATGTATAAGTATTTAAACGACATCAAATCCCCTGAAGATTTAAAAAAATTGTCCTATGAAGAACTTACCGTTCTGGCATATGAGATTCGTAATTTTTTAGTTCAGTCCATTTCTAAAACAGGAGGCCATTTAGCTTCGAATTTAGGTGTTGTGGAATTGACTATGGCACTTCACAAGGTATTTGATAGTCCTAATGATAAATTTGTATGGGACGTTGGGCATCAGGCTTACGTTCACAAGCTATTAACGGGGAGATGTGATCAATTTGATTCCTTAAGACAATATAAGGGATTGAGTGGTTTCCCAAAAAGACATGAGTCCGAGCACGATCACTTTGATACAGGGCATAGTAGTACGTCAATATCTGCTGCAGTGGGTATGGCTCTTGCCAGAGACATCAGAGGTTTAAGCTATGATGTCATCGGTATAATCGGAGACGGTGCCTTAACCGGTGGTATGGCCTACGAAGCGATCAACTATATTGGACACAGTAAAAACAATGTCAAAATTATATTAAATGACAATGAAATGTCTATATCTCATAATGTAGGTGGTATGTCAATTGCGCTCAATAGTTTAAGGACTAGTGAGAACTATTCCAAAATTAAAGGGACGACTAAGACCAAGCTCATGCGCCTTCCATCACTGGGGCAACCAATAGTGGATTTGATCAGTAAGCTTAAGGATTCTTTTAAGTATTTTGTAGTAGATGGTGGTGTATTTTTCGAAGAAATTGGATTGACCTATATTGGACCTATTAATGGTCATGATTTGAGACAATTGGTCAAGCATATGGAAATGATGAAGCAAGTGGATGGTCCTGTGATTCTTCATGTTATTACGCAAAAGGGGAAAGGCTATAAGTTTGCGGAAACAGCCCCTAACTTATATCACGGCGTTGGTAAGTTTGATCCATTCATTCCTCTTAAGAGTGGCGGTAAAAAGGATTACTCAAAGGTATTTGGTGACACACTAATCGATATTGCGGACAAGGATAAAAATGTAGTGGCAATTAGTGCAGCGATGATAGAGGGAACGGGTCTATCTGATTTTTCAAAGTTATACCCAGAGCGTACATTTGACGTCGCAATAGCAGAGCAGCATGCGGTAACGATGGCGGCTGGTATGGCGCTGTCTGGTGTAAAGCCTTTTGTTGCACTTTACTCAACCTTCCTACAAAGAGCTTATGATCAGGTGGTTCATGATGTCTGTATTCAAAAAGCCCCAGTTGTTCTTTGTATAGATCGAGCAGGTCTGGTAGGAAATGACGGTGAAACACATCACGGTATATTTGATATTTCTTATTTATCTCATCTTCCCAATATGATGATTCTTTCGCCAAAGGATGCGACGGAGCTCTCCTATATGCTCAATTTTGCATCGAGTTATAATGAAGGGCCAATTGCGATTCGATATCCAAGAGGCGGTGCGTATGAAATTGATAGTACGTTACCTGATAGCCTGAAGCCAGAGCTTTTAATAGAGGGAACTGAAACGCTGCTAATTGCTACGGGAAAGCTAGTGAAAACTGCCTTAGAAGTGGCAAAGACTTCCAATGGCAAGGTAGGTGTTCTCAATCTTAGAAAAATCAAACCGCTTGATACCGAGGAGCTGGTCAAGCACTGTAAGCCATATAAGACACTTATTACACTTGAAGATCATATTATTGCGGGTGGTATGGGTGAGAATGTTGCCAGTGGTCTTATAAGGGCAGGTGTATCTGTACCTTGCCATCACAGGGGGATAGAGGATCGCTTTATTGAGCAAGGTGAAATGGATGAATTACTTGCTTCAATAGGATTAGATGTCGCTGGAATTCAAGCTTTTATACAGGAGGTAAATCATGTCTAA
PROTEIN sequence
Length: 623
MEKGTAMYKYLNDIKSPEDLKKLSYEELTVLAYEIRNFLVQSISKTGGHLASNLGVVELTMALHKVFDSPNDKFVWDVGHQAYVHKLLTGRCDQFDSLRQYKGLSGFPKRHESEHDHFDTGHSSTSISAAVGMALARDIRGLSYDVIGIIGDGALTGGMAYEAINYIGHSKNNVKIILNDNEMSISHNVGGMSIALNSLRTSENYSKIKGTTKTKLMRLPSLGQPIVDLISKLKDSFKYFVVDGGVFFEEIGLTYIGPINGHDLRQLVKHMEMMKQVDGPVILHVITQKGKGYKFAETAPNLYHGVGKFDPFIPLKSGGKKDYSKVFGDTLIDIADKDKNVVAISAAMIEGTGLSDFSKLYPERTFDVAIAEQHAVTMAAGMALSGVKPFVALYSTFLQRAYDQVVHDVCIQKAPVVLCIDRAGLVGNDGETHHGIFDISYLSHLPNMMILSPKDATELSYMLNFASSYNEGPIAIRYPRGGAYEIDSTLPDSLKPELLIEGTETLLIATGKLVKTALEVAKTSNGKVGVLNLRKIKPLDTEELVKHCKPYKTLITLEDHIIAGGMGENVASGLIRAGVSVPCHHRGIEDRFIEQGEMDELLASIGLDVAGIQAFIQEVNHV*