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SCNpilot_expt_1000_bf_scaffold_1587_curated_5

Organism: scnpilot_dereplicated_Devosia_3

partial RP 28 / 55 BSCG 26 / 51 ASCG 7 / 38
Location: comp(4239..5309)

Top 3 Functional Annotations

Value Algorithm Source
Putative sugar uptake ABC transporter periplasmic solute-binding protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QZU6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 356.0
  • Bit_score: 612
  • Evalue 3.30e-172
ABC-type xylose transport system periplasmic component {ECO:0000313|EMBL:EYR83544.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 357.0
  • Bit_score: 623
  • Evalue 1.50e-175
sbpA; periplasmic substrate-binding protein; ABC transporter; K10546 putative multiple sugar transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 356.0
  • Bit_score: 605
  • Evalue 1.30e-170

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGAAGACCCTTCTTTCGTTGTTCGCAGCGACCGCCATCGGCGTCGCCTCGTTCGTCATGCCCGCGCTCGCGCAGGACAAAGGCGTCGTCGGCATCTCCATGCCGACCAAGACCTCCACGCGCTGGATCTCGGACGGCGAGACCATGGAAAAGCTGTTCAAGGAAGCCGGCTACACCCCGGACCTGCAGTTTGCTGACGACGACATTCCGAACCAGCTCGCCCAGATCGAAAACATGGTTACCAAGGGTGCCAAGGTTCTCGTCATCGGCGCCATCGACGGCACGACGCTGTCCGACATCCTGCAGCGCTCGCACGATGCAGGCGTCAAGGTCATCGCCTATGACCGCCTGATCCGCGATTCCGGCAATGTCGACTACTACGCGACCTTCGACAACTTCCAGGTCGGCGTCCTGCAGGCCACCAGCCTCGTCGACGGCCTCAAGGCAAACTTCGCCGACGTGAAGCCGTGGAACGTCGAACTCTTCGGCGGTTCGCCGGACGACAACAACGCCTTCTTCTTCTATGACGGCGCCATGTCGGTTCTGCAGCCGCTGATCGACAGCGGCGACATCGTCGTCAAGTCCGGCCAGACGGGCATGGAACAGGTCGGCACGCTGCGTTGGGACGGTGCCGTTGCACAGGCCCGCATGGAAAACCTGCTGTCCTCGACCTACACCGACGGTCACGTCAACGGCGTTCTGTCTCCGTATGACGGCCTGTCCATCGGCATCCTGTCGGCTCTCAAGGGTGTCGGCTACGGTTCCGGCGAATTGAAGATGCCGATCGTCACCGGCCAGGACGCTGAACTGCCGTCGGTCAAGTCCATCCTTGCCGGCGAACAGTATTCGACGGTCTTCAAGGATACGCGCGAACTGGCAAAGGTCGCCGTCGGGATGGTCGACTCGCTGATGCAGGGCAAGGAGCCTGAAGTCAACGACACCAAGACCTACGACAACGGCGTCAAGGTCGTTCCGTCCTACCTGCTGAAGCCGGTTGCCGTCGACAAGACGAATGCCAAGGACATCCTGACCACGTCCGGCTATTACACCGCCGAGCAGATCGACAACTAA
PROTEIN sequence
Length: 357
MKTLLSLFAATAIGVASFVMPALAQDKGVVGISMPTKTSTRWISDGETMEKLFKEAGYTPDLQFADDDIPNQLAQIENMVTKGAKVLVIGAIDGTTLSDILQRSHDAGVKVIAYDRLIRDSGNVDYYATFDNFQVGVLQATSLVDGLKANFADVKPWNVELFGGSPDDNNAFFFYDGAMSVLQPLIDSGDIVVKSGQTGMEQVGTLRWDGAVAQARMENLLSSTYTDGHVNGVLSPYDGLSIGILSALKGVGYGSGELKMPIVTGQDAELPSVKSILAGEQYSTVFKDTRELAKVAVGMVDSLMQGKEPEVNDTKTYDNGVKVVPSYLLKPVAVDKTNAKDILTTSGYYTAEQIDN*