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SCNpilot_expt_1000_bf_scaffold_1225_curated_8

Organism: scnpilot_dereplicated_Devosia_3

partial RP 28 / 55 BSCG 26 / 51 ASCG 7 / 38
Location: 3780..5345

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 521.0
  • Bit_score: 916
  • Evalue 1.70e-263
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 513.0
  • Bit_score: 850
  • Evalue 3.30e-244
2-isopropylmalate synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REW0_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 513.0
  • Bit_score: 850
  • Evalue 1.00e-243

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1566
ATGACTGCCGATACAGCGACCCTGAGCAACAAAGACCGGGTCTATATCTTCGACACCACGCTGCGCGATGGCGAACAGAGCCCGGGCGCGACGATGACGCTCGAGGAAAAGCTGCAGGTCGCCGAGGCGCTGGACGAGATGGGCGTCGATATCATCGAGGCCGGTTTTCCGATCGCCTCGAACGGCGATTTCGAGGCCGTCGTCGCGGTGGCGAAGCAGGTGAAGAACTCGGTCGTGGCCGGCCTCGCCCGCGCCATTCCCGCCGACATCGCCCGGGCGGGCGAAGCCATCCGGCATGCCCGGCGCGGCCGCATCCACACCTTCGTATCTACCTCGCCGATCCATCTGGCGCACCAGATGCGCAAGACGGAGGAGGAGGTGCTCGAGATCATCACCACGACGGTGACGCAGGCGCGCGGACTGACGGACAATGTCGAGTGGAGCGCGATGGATGCGACGCGTACGCCGATCGACTACCTGGCCCGATGCGTGGAACTCGCCATCAAGGCCGGCGCAACGACCATCAACCTGCCGGACACCGTGGGCTATGCCATCCCGGCGGAGCACGAGGAGATGTTCCGCTCGATCATTGAGCGAGTGCCGGGTGCGGACAAGGTGATCTTTTCGGCCCATTGCCACAATGACCTCGGGCTTGCGGTGGCCAATTCGCTGGCCGCCGTACGCGGTGGGGCGCGGCAGATCGAGTGCACGATCAACGGGTTGGGCGAGCGGGCTGGCAACGCGGCGCTGGAAGAGATCGTGATGGCGCTGCGGACTCGCGCCGACGCCATGCCCTATCACACCGAGATCGAAAGCACGCACCTCAGCCGCGCCAGCAAGATCGTGTCGGCGGCGGCGAACTTCCCCGTGCAGTACAACAAGGCCATCGTCGGCAAGAATGCCTTCGCGCACGAGAGCGGCATCCATCAGGACGGGATGCTCAAGAACGCGCAGACCTACGAGATCATGACCCCCGCCAGCGTGGGCATCAAGGAAACGACGCTGGTCATGGGCAAGCATTCGGGCCGTGCCGCGTTCAAGGACAAGCTGCGCGAGCTCGGCTACGACCTGGGCGACAATGCCTTCCAGGAGGCATTCGTTCGCTTCAAGGACCTGGCCGACCGCAAGAAGCACGTCTACGACGCCGATATCATCGCGCTGGTGGACGACGAGGTGGGATCGGTCGGCGACCGGGTGAAGCTCGTCGACATGGAGGTGGTGTCCAAGACCGGTGGCGTGCATCGCTGCACGCTGAAGCTCACCATCGACGGCGAGCCCGTCGAGGCCAGCTTCGACGGTACGGGATCGGTCGATGCGATCTTCAATGCGATCAAGGTCGCCGTGGGACAGCAGCCGCACCTGGTGCTCTATGCGGTCGACGGTGTCACCGGGGGCACCGATGCCCAGGCGAGCGCGCATGTGCGGCTTGAAATGAACGGCCGCCTCGTCTCCGGCAATGCGGCAGAGCCCGACACGCTGGTGGCGTCCGCTCGCGCCTATTTGAATGCCTACAACCGGCTGCTGATCGAGCGTGGCGCCTCGGCGCAGGGCGCGCTCGCGGGCTGA
PROTEIN sequence
Length: 522
MTADTATLSNKDRVYIFDTTLRDGEQSPGATMTLEEKLQVAEALDEMGVDIIEAGFPIASNGDFEAVVAVAKQVKNSVVAGLARAIPADIARAGEAIRHARRGRIHTFVSTSPIHLAHQMRKTEEEVLEIITTTVTQARGLTDNVEWSAMDATRTPIDYLARCVELAIKAGATTINLPDTVGYAIPAEHEEMFRSIIERVPGADKVIFSAHCHNDLGLAVANSLAAVRGGARQIECTINGLGERAGNAALEEIVMALRTRADAMPYHTEIESTHLSRASKIVSAAANFPVQYNKAIVGKNAFAHESGIHQDGMLKNAQTYEIMTPASVGIKETTLVMGKHSGRAAFKDKLRELGYDLGDNAFQEAFVRFKDLADRKKHVYDADIIALVDDEVGSVGDRVKLVDMEVVSKTGGVHRCTLKLTIDGEPVEASFDGTGSVDAIFNAIKVAVGQQPHLVLYAVDGVTGGTDAQASAHVRLEMNGRLVSGNAAEPDTLVASARAYLNAYNRLLIERGASAQGALAG*