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SCNpilot_expt_1000_bf_scaffold_3886_curated_1

Organism: scnpilot_dereplicated_Devosia_3

partial RP 28 / 55 BSCG 26 / 51 ASCG 7 / 38
Location: comp(3..602)

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein releasing system transmembrane protein LolC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R877_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 198.0
  • Bit_score: 243
  • Evalue 2.20e-61
Multidrug ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB08494.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 186.0
  • Bit_score: 255
  • Evalue 8.00e-65
lipoprotein releasing system transmembrane protein LolC; K09808 lipoprotein-releasing system permease protein similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 198.0
  • Bit_score: 243
  • Evalue 7.10e-62

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Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
TTGAGCGTGCCGGCACCTGCGGCGAAGCCGGCACCCGGACCGTTCTCGGGCTTCGAGTTCATGGTGGCGGGGCGCTACCTGCGCTCGCGGCGCAAAGACACGTTCATCTCCGTGATTTCGGGGCTGACGCTGGCCGGCGTCGCCATTGGCGTCGCCACGCTGATCGTCGTCATGTCGGTGATGAACGGTTTTCGCGAGGAACTGCTGGGCAAGCTCCTGGGGCTCAACGGGCACTTCGTGGCCTATCCGATCGAGCAGCAGTTCAACGACTACGACCGGGTGGTCACCGATATCGAGAAGGTGCCGGGGGTCGTTCATGCCATCGCGATCGTCGACGGGCAGGCGCTTGCCTCCGGCCTCTCCCAGGAATCGACTGGCGCCTCGGTGCGCGGCATCACGGCGTCCGGCGTCGAGAAGCTGCCGATGCTGGCCAACGGGGTGGAGCAGGGCGGCTGGGCCGACTGGGACACCGGTGGCGGAGTCGCGATCGGCACCCGGCTGGCGCAAAAGCTGGGGCTCAGCATCGGCGACCCGATCACCATCGTGAACCCGAACGGCACGCAGACGCCGTTCGGCAAGACGCCGCAGATCCGATCGTAT
PROTEIN sequence
Length: 200
LSVPAPAAKPAPGPFSGFEFMVAGRYLRSRRKDTFISVISGLTLAGVAIGVATLIVVMSVMNGFREELLGKLLGLNGHFVAYPIEQQFNDYDRVVTDIEKVPGVVHAIAIVDGQALASGLSQESTGASVRGITASGVEKLPMLANGVEQGGWADWDTGGGVAIGTRLAQKLGLSIGDPITIVNPNGTQTPFGKTPQIRSY