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SCNpilot_expt_1000_bf_scaffold_17620_curated_8

Organism: scnpilot_dereplicated_Devosia_3

partial RP 28 / 55 BSCG 26 / 51 ASCG 7 / 38
Location: 5456..6052

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE79_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 205.0
  • Bit_score: 315
  • Evalue 3.50e-83
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 205.0
  • Bit_score: 334
  • Evalue 1.40e-88
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 205.0
  • Bit_score: 315
  • Evalue 1.10e-83

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Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGTCGAAGCGCAATTCCGTCAAACACAAGATCGATCGCCGCCTTGGCGAAAACCTCTGGGGCCGTCCGAAGTCCCCGCTGAACGCCCGTGCCTATGGCCCCGGCCAGCACGGCCAGCGCCGCAAGGGCAAGACCTCGGACTACGGCCTGCAGCTGCGCGCCAAGCAGAAGCTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCACGCGTCAAGGGCGATACCGGCGAGAACCTGATCGGCCTGCTCGAGAGCCGCCTGGACGCGATCGTCTATCGCGCCAAGTTCGTGCCGACCGTCTTCTCCGCTCGCCAGTTCGTGTCGCATGGCCACGTGCTGGTGAACGGCAAGCGCGTCACCATCCCGTCCTACCAGGTCCAGCCGGGCGACAAGGTCGAGCTCAAGGAGAAGTCCCGCCAGCTCGCCATCGTGCTCGAGGCCAACCAGCTCTCCGAGCGTGACGTGCCGGAGTACGTCGAGGTCGATCACTCCAAGCAGTCGGCGACCTTCGTGCGCATTCCCTCGCTGTCGGATGTGCCGTACCCGGTGCAGATGGAACCGAACCTCGTCGTCGAATTCTATTCGCGCTGA
PROTEIN sequence
Length: 199
MSKRNSVKHKIDRRLGENLWGRPKSPLNARAYGPGQHGQRRKGKTSDYGLQLRAKQKLXXXXXXXXXXXXARVKGDTGENLIGLLESRLDAIVYRAKFVPTVFSARQFVSHGHVLVNGKRVTIPSYQVQPGDKVELKEKSRQLAIVLEANQLSERDVPEYVEVDHSKQSATFVRIPSLSDVPYPVQMEPNLVVEFYSR*