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SCNpilot_cont_300_bf_scaffold_172_curated_20

Organism: scnpilot_dereplicated_Devosia_5

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38
Location: comp(20686..21309)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6L1_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 215.0
  • Bit_score: 324
  • Evalue 8.00e-86
Cold shock protein CspB {ECO:0000313|EMBL:CDP54278.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 207.0
  • Bit_score: 342
  • Evalue 4.00e-91
cold shock protein CspB; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 215.0
  • Bit_score: 324
  • Evalue 2.50e-86

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGGGGCCAAGTTTACAGCCGACGGTGAAGAGCCCGGGTTCCGGTCCGACGAGACCGGTTCGCGCGGACAGCACCCGGCATCCGACCACGGCGGTGACGCCAATCTCGATGTCATCGAGGTGGTGGGGTCGATCAAGTGGTTCGACGTGTCCAAGGGGTTCGGCTTCATCGTACCCGATGATGGCCGCCCCGATGTTCTCCTGCATGTGACCTGCCTCCGGCGCGACGGCTACCAGACCGCCTATGAGGGGTCGCGCATCGTCGTCGAAGCACTGGCCCGGCCCGGCGGATTGCAGGCCTTCCGCATCCTGTCGATGGACGATTCGACCGCCAAGCACCCGGCTCAGATGCCGGCGCCGCGGACGCACGTCACGGTCGAGCCGACCAGCCGCCTCGAGCGGCTCGAGGTGAAGTGGTTCAACCGGATTCGCGGCTTCGGCTTCCTGTCGGCCGGCGACGGGGCCCCGGACATCTTCGTCCACATGGAAACCCTGCGCCGCTTCGGCATCACCGAACTGCGTCCCGGCCAGCACGTGCTGGTGCGCTATGGCACCGGCCCCAAGGGGCTGATGGTCGCCGAGATCCGTCCCGACGGCTGGGGCGACGCGCCGTCCTCGCACTGA
PROTEIN sequence
Length: 208
MGAKFTADGEEPGFRSDETGSRGQHPASDHGGDANLDVIEVVGSIKWFDVSKGFGFIVPDDGRPDVLLHVTCLRRDGYQTAYEGSRIVVEALARPGGLQAFRILSMDDSTAKHPAQMPAPRTHVTVEPTSRLERLEVKWFNRIRGFGFLSAGDGAPDIFVHMETLRRFGITELRPGQHVLVRYGTGPKGLMVAEIRPDGWGDAPSSH*