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SCNpilot_expt_1000_bf_scaffold_97_curated_15

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 9821..11113

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 430.0
  • Bit_score: 530
  • Evalue 2.80e-147
GTPase and tRNA-U34 5-formylation enzyme TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 431.0
  • Bit_score: 407
  • Evalue 4.70e-111
tRNA modification GTPase MnmE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q5_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 431.0
  • Bit_score: 407
  • Evalue 1.50e-110

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGGACGGCGATACGATTGTCGCCCTGTCGTCGGGCGCTCTCCCCTCCGGCGTGGCCGTGATCCGGCTCAGCGGACCCGGAACGAGTCGGGTTCTAGAATCACTTGCTATATCGGACATCGAACCGCGGCGCCTGGCGCTGCGGTCGCTGCGGCTTGCCGGCGAGCTGATCGACAACGGACTCGTCGCCTGGATGCCGGGACCGCAGAGCTTTACCGGCGAGGACACGGCGGAGCTGCAGGTGCATGGCTCGGCCGCGGTCGTGCGTCGTCTGCTTCGTGGAATCACGACGATCGAGGGCGTGCGGCTCGCCGAGGCTGGCGAGTTCACGAGGCGTGCCTTCGCCAACGGCAAGCTCGACCTGACGGAAGTGGAAGGTCTCGGGGACCTCATCGAGGCCGAGACGGAGACGCAGCGGCAGCAGGCGGTGGCCCGGCTGGCCGGTGGCATCAGCGAGAGGATCGCGGCGTGGCGCGAGACGCTGCTCGACGTCCGGGCCGAGGTGGAGGCGCGCCTCGACTTCTCGGACGAGGGAGATGTGTCGCAGGAGCTGCCACATAACGTGATTCAGGCCGTTGGTGCGCTCGCCGGAGAGCTTCGGGGGGCCGTGGAATCGGTTGGCCGCGGCCGTATTGTTCGCGAGGGCCTGCGCGTGGCGCTGGCGGGCCCCCCCAATGTCGGCAAGTCGTCGCTGCTCAATGCGCTGGCGAAATCCGATCTCGCCATCGTCAGCGATGAGCCGGGGACGACTCGCGACGTGCGGGAAGTGTCGCTCGATCTGGGCGGGCGGCTTGTCATGCTCATCGACATGGCGGGGCTGCGCAGCAGCGACAGCCGGGCCGAGGCTGAGGGCATCCGTCGCGCGGAGGCGGAGATCGCCCGGGCCGATCTCGTGCTCTGGCTGGTCGCCCCGGATGTCGCTCCGCTGACGCCGCCGCAGCGGACGCCGCTCTGGACGGTTGGAAGCAAGGCGGACCTCGGGCCGGTCGCGGCCGAGTATGTGCTATCGGCCGACACCGGTCTCGGGATAACCGAGCTCCTCGCGGCGCTGGCGGGTTTCGCGGAGACGGCGGCCGGCAGCGGCCCGCCGGCCCTGCTCAGCCGCGAGCGTGATCTGGTGGCGTTGGCGGCCGCCCGGGACGCGGTCGAGCGCTTCCTGACCGAGGGCGCGACAGATGAGATCGCGGCGGAGCATCTACGCCAGGCGAGCCTCGCGCTGGAGCGGTTGCTGGGGCGGATCGACACGGAGCAGGTGCTGGATCGGCTGTTCGCGGCCTTCTGCATCGGCAAGTGA
PROTEIN sequence
Length: 431
MDGDTIVALSSGALPSGVAVIRLSGPGTSRVLESLAISDIEPRRLALRSLRLAGELIDNGLVAWMPGPQSFTGEDTAELQVHGSAAVVRRLLRGITTIEGVRLAEAGEFTRRAFANGKLDLTEVEGLGDLIEAETETQRQQAVARLAGGISERIAAWRETLLDVRAEVEARLDFSDEGDVSQELPHNVIQAVGALAGELRGAVESVGRGRIVREGLRVALAGPPNVGKSSLLNALAKSDLAIVSDEPGTTRDVREVSLDLGGRLVMLIDMAGLRSSDSRAEAEGIRRAEAEIARADLVLWLVAPDVAPLTPPQRTPLWTVGSKADLGPVAAEYVLSADTGLGITELLAALAGFAETAAGSGPPALLSRERDLVALAAARDAVERFLTEGATDEIAAEHLRQASLALERLLGRIDTEQVLDRLFAAFCIGK*