name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_97_curated_1
unknown
|
Not on your lists |
2..79
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_97_curated_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(146..505)
|
XRE family transcriptional regulator n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CH94_9RHOB
XRE family transcriptional regulator {ECO:0000313|EMBL:KFL26151.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
transcriptional regulator, XRE family
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(502..1071)
|
Smr protein/MutS2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08417.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Smr protein/MutS2
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_4
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1087..1806)
|
Transporter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC35145.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
transporter
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_5
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1951..2397
|
exclusion suppressor FxsA n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B64DBA
FxsA cytoplasmic membrane protein {ECO:0000313|EMBL:KFC68665.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2451..2984
|
Protein-export protein SecB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R3_PELHB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state); K03071 preprotein translocase subunit SecB
|
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SCNpilot_expt_1000_bf_scaffold_97_curated_7
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3049..3468)
|
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2NCE9_9ACTO
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:KFD44177.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
Glyoxalase/bleomycin resistance protein/dioxygenase; K04750 PhnB protein
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3542..4255
|
Helix-turn-helix type 11 domain protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZC91_METPB
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CDP51120.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_9
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4228..4938)
|
DNA polymerase III epsilon subunit; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III epsilon subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R2_PELHB
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KKB08415.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_10
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4939..5535)
|
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
coaE; dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24]
Dephospho-CoA kinase n=1 Tax=Ochrobactrum intermedium 229E RepID=U4VCU9_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_11
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5535..6356)
|
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
Shikimate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R0_PELHB
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_12
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6895..7929
|
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
uroporphyrinogen III decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
Uroporphyrinogen decarboxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q8_PELHB
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7932..8363
|
Putative membrane protein, possible involvement in cytochrome functioning/assembly n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q7_PELHB
Membrane protein {ECO:0000313|EMBL:KKB07807.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein; K08973 putative membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_14
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8539..9804
|
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Transcription termination factor Rho n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q6_PELHB
transcription termination factor Rho; K03628 transcription termination factor Rho
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9821..11113
|
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
GTPase and tRNA-U34 5-formylation enzyme TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q5_PELHB
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_16
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11467..13017
|
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q4_PELHB
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_17
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13014..13601
|
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
rRNA small subunit methyltransferase, glucose inhibited division protein GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000380A30B
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_18
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13616..14416
|
Chromosome (Plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q2_PELHB
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KKC35134.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
chromosome partitioning protein ParA; K03496 chromosome partitioning protein
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_19
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14424..15293
|
Chromosome (Plasmid) partitioning protein ParB / Stage 0 sporulation protein J n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q1_PELHB
Chromosome (Plasmid) partitioning protein ParB / S tage 0 sporulation protein J {ECO:0000313|EMBL:CDP52249.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_20
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15290..16312)
|
DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III delta subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB13768.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_21
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16309..16803)
|
Uncharacterized protein {ECO:0000313|EMBL:KKC35131.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_22
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16790..19408)
|
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7P8_PELHB
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_23
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19502..20179
|
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11DE5_MESSB
Alanine racemase {ECO:0000313|EMBL:KKB76249.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein; K06997
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_24
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
20176..20721
|
GCN5-related N-acetyltransferase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PNR0_KRIFD
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADB32728.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_25
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20814..21497
|
DNA-binding response regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7P6_PELHB
Transcriptional regulator {ECO:0000313|EMBL:KFL27791.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
DNA-binding response regulator
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_26
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21626..22087
|
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7P5_PELHB
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases {ECO:0000313|EMBL:CDP52255.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Crp family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_27
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22084..22473)
|
Endoribonuclease L-PSP n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28RS5_JANSC
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABD54587.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_28
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22466..23287)
|
exodeoxyribonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease III n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7P4_PELHB
Exodeoxyribonuclease III {ECO:0000313|EMBL:KKB07796.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_29
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23326..23769)
|
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJY9_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_97_curated_30
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23771..24409)
|
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7P3_PELHB
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
outer membrane lipoprotein carrier protein LolA
|