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SCNpilot_expt_1000_bf_scaffold_97_curated_11

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(5535..6356)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 271.0
  • Bit_score: 376
  • Evalue 4.30e-101
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 273.0
  • Bit_score: 321
  • Evalue 3.70e-85
Shikimate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R0_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 273.0
  • Bit_score: 321
  • Evalue 1.20e-84

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Taxonomy

Devosia epidermidihirudinis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
GTGAAACGCGCCTTCGTCATCGGCCATCCCATCAACCACTCCCGCTCGCCGCTCATTCACGGCCACTGGCTCAGGGCGCACGGGATCGACGGCTCCTATGAGGCGATCGACGTAGCGCCTCCCGACCTGCCCGCCTTCTTCGCGCGGGTGAGCGCAGGCGAGTTCGTTGGCGGCAATGTCACCATTCCGCACAAGGAGGCCGCCTTCGCCTTCGCCGACGAGCTCGATCCACTGTGCGAGACGATCGGCGCCGCCAACACGCTGCTCTGGCGGCCCGACAGCGTGCTGGGCTTCAACACCGACTATCTCGGCTTTCTCGGCAATCTCGACCAGAACGCGCCGGGCTGGGACGACGGGCTCGAGACGGCCATCGTCATCGGGGCAGGGGGGGCGGCGCGGGCGATCCTGGTCGCCCTCAAGTCGCGCAACGTCCCCATCATCCACCTGCTCAACCGTACCATCGAGAAGGCGCAGGACCTTGCCATCGACCTCGAAGGGCCGATCAAGGCTGGCCGGCTCGGCGACTTCGCCGGCGTGGCGACGGGGGCCGGGCTCGTGGTCAATTGCTCCTCGGTCGGCATGCATGGGTCGAGCTTTGAGGGGATCGATCTCCGCCTGCTGCCGAAATCGGCCGTGGTGACGGACCTCGTCTATGTGCCGCTCGAAACTCCGCTGCTTGCCGCTGCGCGTCAGGCCGGCCTCAAGACGGTCGACGGGCTCGGCATGCTGCTGCACCAGGCGGTCCCCGGCTTCGAGGCCTGGTTCGGCGTCCGCCCTGAGGTGACGCCGGAACTGCGGCGGCTCGTCGAGGCGACGCTCTGA
PROTEIN sequence
Length: 274
VKRAFVIGHPINHSRSPLIHGHWLRAHGIDGSYEAIDVAPPDLPAFFARVSAGEFVGGNVTIPHKEAAFAFADELDPLCETIGAANTLLWRPDSVLGFNTDYLGFLGNLDQNAPGWDDGLETAIVIGAGGAARAILVALKSRNVPIIHLLNRTIEKAQDLAIDLEGPIKAGRLGDFAGVATGAGLVVNCSSVGMHGSSFEGIDLRLLPKSAVVTDLVYVPLETPLLAAARQAGLKTVDGLGMLLHQAVPGFEAWFGVRPEVTPELRRLVEATL*