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scnpilot_p_inoc_scaffold_140_curated_87

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 111151..111879

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMC2_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 252.0
  • Bit_score: 201
  • Evalue 7.00e-49
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 252.0
  • Bit_score: 201
  • Evalue 2.20e-49
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACU64027.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 252.0
  • Bit_score: 201
  • Evalue 9.80e-49

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 729
ATGATTAACTGCCTGATTATCGACGACGAGCAGCATTGCATCGACACATTAACCGCGATGCTGAAAGCCCGGTTTTCGGAAAAGGTATCCGTTGCCGGCTCCACGACCGATAGTCGCGAAGCCGTAGAGATGATCGGGCAGCATCAGCCTGACGTACTTTTTATCGATGTTGAAATGCCCTATCTCAATGGCATACAAGTAGTTGATGTAATTCCAAACCGTAGTTGCGCAGTCATTTTCACGACCGCTTATGACCGGTATGCATTACAGGCGCTCAAAACCGAAGCGGTGGACTATTTGCTGAAACCGATCAGTCTGCGGGAATTGGGCGAAGCCATCGAAAAAGCGGCGCAGCGATTACAGCTTTTACGAGCGGAAGTGACAAGAAAGGATGTGCCGCTGCCTCAGAAATTGCTTTTACCAACCAGCAAAGGGCTGCTGGCGGCCAGTATCCCCAACATCATCCGGGTGGAAGCCGATAGCAATTACTGCCGTTTTCACATTGACGGGAAGCCCGAAATCGTGGTCGCAAAGACATTGAAAGAGTATGAGGAGATCCTGGTTCCCTGCCATTTTTTCAGAGTACATCAGTCTCATCTGATCAACCTGCACTACGTCGAATACTTTCACCCCGGCCTGGAAGAATACGTGATCCTCACCAATGGGGAGCAAATAGAGGTTTCCAGGCGCCGCAAAGCCGAATTCCTTCAAAAATTGGCCGCATTATAG
PROTEIN sequence
Length: 243
MINCLIIDDEQHCIDTLTAMLKARFSEKVSVAGSTTDSREAVEMIGQHQPDVLFIDVEMPYLNGIQVVDVIPNRSCAVIFTTAYDRYALQALKTEAVDYLLKPISLRELGEAIEKAAQRLQLLRAEVTRKDVPLPQKLLLPTSKGLLAASIPNIIRVEADSNYCRFHIDGKPEIVVAKTLKEYEEILVPCHFFRVHQSHLINLHYVEYFHPGLEEYVILTNGEQIEVSRRRKAEFLQKLAAL*