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scnpilot_p_inoc_scaffold_71_curated_22

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 33706..33999

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Alistipes sp. CAG:268 RepID=R6VW18_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 77.0
  • Bit_score: 73
  • Evalue 1.20e-10
Helix-turn-helix protein {ECO:0000313|EMBL:CDC98639.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 77.0
  • Bit_score: 73
  • Evalue 1.60e-10
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 84.0
  • Bit_score: 64
  • Evalue 2.20e-08

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Taxonomy

Alistipes sp. CAG:268 → Alistipes → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 294
ATGAAGCAACAAATCAAACATCCTACTTTACTAAAAGCGCTTGCGAAAAGACTGAAATACATTCGTAACATCAGGAATATCCGGCAGGAAGACGTCGATATGGATACCGGGATCAATATCTCCAGAATTGAGATGGGTATTCAAAACTTAACGCTCTCTACCCTTTACACTTTGTGTGAATATTATTCTGTTTCCTTAGCCGATTTTTTTTCGGAAGGTTTTGTTCCGGAAGATCTTGTTTTTCCGGCTGAAGATCCAAAACCGGATTCTTTATCCAGGAACGATCCGGAGTAA
PROTEIN sequence
Length: 98
MKQQIKHPTLLKALAKRLKYIRNIRNIRQEDVDMDTGINISRIEMGIQNLTLSTLYTLCEYYSVSLADFFSEGFVPEDLVFPAEDPKPDSLSRNDPE*