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scnpilot_p_inoc_scaffold_2377_curated_11

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(9452..11785)

Top 3 Functional Annotations

Value Algorithm Source
LPS-assembly protein LptD n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG41_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 779.0
  • Bit_score: 1401
  • Evalue 0.0
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 779.0
  • Bit_score: 1401
  • Evalue 0.0
organic solvent tolerance protein; K04744 LPS-assembly protein similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 769.0
  • Bit_score: 869
  • Evalue 7.80e-250

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2334
GTGGCCGCGGCGGTGGTCGGCGCCTGCCTGGCCAGCGCCGCGCAGGCGCAGGACAAGGGCCTCACGCTGCGCCCCAGCCTGCGCTTGCAGGAGCAGTTGCCGGCCGACGTGCGCAGCCAGGCGCCCACGTTCGTCTCCGGCCAGCGCATCGAAGGCCACACCGGCGAGTCCACCACCGTCGAGGGCGAGGCCGAGCTGCGCCGCCACGACACCGTGATCCGCGCCGACCGCCTGAGCTTCGACGAGGGCACGCGCGAGGCCCATGCCGAAGGCAACGTGCTCGTCAACCGCAGCGGCGACCGGTTCATGGGCCCCGAGCTGCGGCTCAACGTGGACACCTTCAAGGGCTACTTCGACCAGCCGCAGTTCGAGCTGCTCAACAACAACGGCCGCGGCGACGCCGCGCGCATGGACTTCCAGGACCAGGACCATTCCACCGCGCACCAGGCCCGCTACAGCACCTGCCCGCGCGTGCCGGGCGCCGACTGGATGCCGGCCTGGCTGGTGCGCGCCAACCGCATCGAGTTCGACAACGTGGAGCAGGTCGGCACGGCCTATGGCGGCGCGCTCGAATTCAAGGGCGTGCCCATCCTGGGGGCGCCCTACTTCACCTTCCCGCTGAGCGACCAGCGCAAGTCGGGCCTGCTGCCGCCGGCCATCAACCTGGACAACCTGAGCGGCCTCGAGCTCACGCTGCCCTACTACCTCAACCTGGCGCCGAACTACGACCTGACGCTGTTCCCCACGCTGATGACCAAGCGCGGGATCGACATCGGCGCCGAGTTCCGCTACCTGCAGCCCGACTACACCGGCCGCCTGCGCGGCTCGTTCATGCCCTCGGACCGCCTGCGCGGCGAGGACCGCTGGAGCTACACGCTGCAGCACACGCAGGCCCTGAGCAACGCCCTCAACCGCCTGGGCGGCAGTGGCAGTTCCGGCCTGTCGCTCAACCTCAACCGGGTGAGCGACGACAACTACTGGCGCGACTTCCCGCGCGCCTCGGCCACGCTGACGCAGCGCCTGCTGCCCAGCGACGCCGTGGTCAGCTGGGGCAAGGGCCCCTGGTCGGCCTCGGCCGGTGTCTACACCTGGCAGACGCTGCAGGACATCGATACGCCGATCACGCCGCCCTACGACCGCCTGCCCTCGCTGGGCCTGAACTATGGACTGAGCGACCTGAACTGGGGCGGCCTGTCGGGCCGCGGCGCGGTGTCGGTCTACGGCGAGTACACGCGCTTCGAGTCCGATCCCCTGCTCACCGGCCAGCCCAACGGCGAGCGCGCAATGGCCGTCGCGACCATCAGCCACCGCTTCCAGACGCCGGGCTGGTTCATCGAGCCGCGCGCGCGGCTGCACAGCACGCAGTACAACTTCGACCAGCCGCTGGCCAATGGCCAGCGCAGCGCCTCGCGCGCCGTGCCCACCGTCAGCCTGGACAGCGGCCTGGTCTTCGAGCGCGACGCCAGCTACTTCGGCCGCGCCTTCCTGCAGACCCTGGAGCCGCGCGCCTACTTCACCTGGACGCCCTACCGCGACCAGAGCTTCCTGCCCAACTACGACTCGGCCGCGACCGACTTCAACCTCGCGACCATCTACTCCGACAACGTCTTCACCGGCAACGACCGCATCTCCGACACGCGCGGTGTCACCCTGGGCGTGAGCTCGCGCCTGCTCGACCCCGGCACCGGTGCCGAGATCGTGCGCCTGGGCATCGCGCAGCGCTACCTGCTGGCCGACCAGGACGTCACGCTGCCCGGCGGCACCCCCGTGCAGGAGCGCTTCAGCGACGTGCTGCTGGCCGCGCGCGTGCAGTGGACGCCGCGCTGGCTGTTCGACACCACCTTCCAGTACAACCCCAGCAGCAACGAGTCCGTGCGCACCACCGTGAGCGCGCGCTACACGCCCGGGCCCTACCGCGTGCTCAGCGCCGCCTGGCGCCTGCAGCGAGGCGCCTCCGAGCAGTTCGACATTGGCTGGCAGTGGCCGCTGAGCGGCATCTTCGGCCGCAGCCCCGAGGCCGTGCCCGGCCAGGCCCTCGGCCCCGGCCAGTGGTATGGCGTGGGTCGCGTCAACTACAGCGTGCCCGACCGCAAGATCGTCGATCTGGTGGCTGGCTTTGAGTACGATGCCGGCTGCTGGATCGGGCGCGTGGTGCTCGAAAGGCTCCAGCGCAGCGCGGCCTCGGCGAACCAACGCATCCTGTTCCAGCTCGAATTCACGGGCTTCACGCGCCTCGGCTCCAACCCGCTGCAGACCCTCAGGGACAACGTGCCGCGCTACCAATACCTGCGCGAAGAAATCAACCCGCCGAGCCGGTTCCAACGTTATGACTGA
PROTEIN sequence
Length: 778
VAAAVVGACLASAAQAQDKGLTLRPSLRLQEQLPADVRSQAPTFVSGQRIEGHTGESTTVEGEAELRRHDTVIRADRLSFDEGTREAHAEGNVLVNRSGDRFMGPELRLNVDTFKGYFDQPQFELLNNNGRGDAARMDFQDQDHSTAHQARYSTCPRVPGADWMPAWLVRANRIEFDNVEQVGTAYGGALEFKGVPILGAPYFTFPLSDQRKSGLLPPAINLDNLSGLELTLPYYLNLAPNYDLTLFPTLMTKRGIDIGAEFRYLQPDYTGRLRGSFMPSDRLRGEDRWSYTLQHTQALSNALNRLGGSGSSGLSLNLNRVSDDNYWRDFPRASATLTQRLLPSDAVVSWGKGPWSASAGVYTWQTLQDIDTPITPPYDRLPSLGLNYGLSDLNWGGLSGRGAVSVYGEYTRFESDPLLTGQPNGERAMAVATISHRFQTPGWFIEPRARLHSTQYNFDQPLANGQRSASRAVPTVSLDSGLVFERDASYFGRAFLQTLEPRAYFTWTPYRDQSFLPNYDSAATDFNLATIYSDNVFTGNDRISDTRGVTLGVSSRLLDPGTGAEIVRLGIAQRYLLADQDVTLPGGTPVQERFSDVLLAARVQWTPRWLFDTTFQYNPSSNESVRTTVSARYTPGPYRVLSAAWRLQRGASEQFDIGWQWPLSGIFGRSPEAVPGQALGPGQWYGVGRVNYSVPDRKIVDLVAGFEYDAGCWIGRVVLERLQRSAASANQRILFQLEFTGFTRLGSNPLQTLRDNVPRYQYLREEINPPSRFQRYD*