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scnpilot_p_inoc_scaffold_2023_curated_14

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(13671..14903)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 410.0
  • Bit_score: 794
  • Evalue 5.40e-227
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 410.0
  • Bit_score: 794
  • Evalue 7.50e-227
ribosomal protein s1; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 410.0
  • Bit_score: 740
  • Evalue 2.90e-211

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
CTGGAATTCAAGGTCATCAAGCTCGACCGCAAGCGCAACAACGTGGTGCTGAGCCGCCGCGCCGTGGTGGAAGCCTCCATGGGCGAAGAGCGCGCCAAGCTGATGGAAACCCTGAAGGAAGGCGCCATCGTGCACGGCGTGGTCAAGAACATCACCGAGTACGGTGCGTTCGTCGACCTCGGCGGCATCGACGGCCTGCTGCACATCACCGACATGGCCTGGCGCCGCGTGCGCCACCCCAGCGAGGTGGTGCAGGCCGGCCAGGAAATCACGGCCAAGATCCTCAAGTTCGACACCGAGAAGCAGCGCGTCTCGCTGGGCCTCAAGCAGATGGGCGACGACCCCTGGCTGGGCGTGAGCCGCCGCTACCCGCAGGGCACCCGCATGTTCGGCAAGGTCACGAACATCGCCGACTACGGCGCGTTCGTGGAACTCGAGCCGGGCATCGAAGGCCTGGTGCACGTCTCCGAAATGGACTGGACCAACAAGAACGTGGCCCCGTCCAAGCTGGTGTCGCTGGGTGACGAGGTCGAGGTCATGGTCCTCGACATCGACGAAGACAAGCGCCGCATCTCCCTGGGCATGAAGCAGTGCCGCGCCAACCCCTGGCACGAATTCGCCGAGCAGACCAAGCGCGGCGACCGCGTCAAGGGCCCGATCAAGTCGATCACCGACTTCGGCGTGTTCGTCGGCCTGGCCGCCGGCATCGACGGCCTGGTGCACCTGTCCGACCTGTCCTGGAACGAAGCCGGCGAACAAGCCGTGCGCAACTACAAGAAGGGCCAGGAAGTCGAGGCCGTGGTGCTCGCCATCGACGTCGAGCGCGAGCGCATCAGCCTGGGCATCAAGCAGCTCGACGGCGACCCGTTCACCACCTTCGTATCGGTGAACGACAAGGGCTCCGTCGTGACCGGCAAGGTCAAGACCGTGGACGCCAAGGGCGCCGAAATCGACCTCGGCGAAGACGTGCTCGGCTACCTGCGTGCCTCGGAAATCAGCCGCGACCGCGTGGAAGACGCCCGCAACGTGCTCAAGGAAGGCGACGAGGTCTCGGCCGTGGTGGTCAACGTCGACCGCAAGACGCGCAACATCCAGCTGTCGATCAAAGCCAAGGACAACGCCGACGCGCAGGAAGCCATGGCCAACCTGAGCCAGAGCGCGGGCAATGCCGGCACCACCAGCCTGGGCGCCCTGCTGCGCGCCAAGCTGGACAACAGCAGCAACGGCCGCTGA
PROTEIN sequence
Length: 411
LEFKVIKLDRKRNNVVLSRRAVVEASMGEERAKLMETLKEGAIVHGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVQAGQEITAKILKFDTEKQRVSLGLKQMGDDPWLGVSRRYPQGTRMFGKVTNIADYGAFVELEPGIEGLVHVSEMDWTNKNVAPSKLVSLGDEVEVMVLDIDEDKRRISLGMKQCRANPWHEFAEQTKRGDRVKGPIKSITDFGVFVGLAAGIDGLVHLSDLSWNEAGEQAVRNYKKGQEVEAVVLAIDVERERISLGIKQLDGDPFTTFVSVNDKGSVVTGKVKTVDAKGAEIDLGEDVLGYLRASEISRDRVEDARNVLKEGDEVSAVVVNVDRKTRNIQLSIKAKDNADAQEAMANLSQSAGNAGTTSLGALLRAKLDNSSNGR*