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scnpilot_p_inoc_scaffold_1660_curated_12

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 12428..13357

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUJ4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 302.0
  • Bit_score: 329
  • Evalue 2.80e-87
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK92884.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 302.0
  • Bit_score: 329
  • Evalue 4.00e-87
regulatory protein, LysR:LysR, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 318.0
  • Bit_score: 114
  • Evalue 7.70e-23

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGCGTCAGATCGCGCTGATGGTGGCGCTGCTGGACGCGCAGAGCCTGAGCCAGGCCGCGGAGCGCATGGGCCTCACGCCGCCGGCGGCCAGCCAGTCGCTGCAGCGACTGCGCGAGTTCTTCGGCGACGAGCTTGTGCAGCGCCAGGGCTCGGACTATGTGGCCACGCCCCTGGGGCAAGGCGTGCTGGCGTCGTTCCGGGAGATGGTGCATCTGTGGCAGGACATCACCTCGGGCGCGCCTTTCGACCCCGCCAGCGGCGAGGCGCATCTGAGGATCATGAGTGCCGAGGGCTTCACGCGGGTCGACCTGAACGCCTGCTACAGCGCCATCGTGGCCCTGGCGCCGCATGTGCGGCTCGATGTGCGCGAGCCCGACGCGGCCACCGGGGGCTACGAGGGGCTGCGAACCGCGGACGCCGACGTTCTGCTGACCGCGTGGCCACCCCCCGAGGACGACCCGGATTTGCACGCTGAGCCGTTGCCGGCGACCACGTTCACCCATTGCTGCCTCAGCGCGGCGCATCCGCGCATCGGCGACAGCTTGAGCCTGCAGCAATACCTGGCCGAGCACCACCTATTGGCCTCGGTGACGATGCGCGCCACCGAGGCCGCCGTGCTGCCCATCGACCGCTGGCTCAAGAGCATTGGCCTGCCGCCGCGGTCCTGCAGTGTGGTCTATCCCATTGATCGTCTGGCCCACGTCTTGTCCACGACGGACCGTTTGGCCACGGTGGCGCCCATCGATGGAAATGACCTGCGCCGACGTGCCCCCGGGCTGAGGCTACTGCCCTTGCCGCCCGAACTGCCCCGGTCCTGGCGCCCGAACTACATGGTGTGGCACCACCGCACCCACCAAAGCCCGCCCCACCGCTGGCTGCGGGAGCGGCTGCGGGAACACGTGGCGCTGGATCCTGTGGTGGCGGCCTAA
PROTEIN sequence
Length: 310
MRQIALMVALLDAQSLSQAAERMGLTPPAASQSLQRLREFFGDELVQRQGSDYVATPLGQGVLASFREMVHLWQDITSGAPFDPASGEAHLRIMSAEGFTRVDLNACYSAIVALAPHVRLDVREPDAATGGYEGLRTADADVLLTAWPPPEDDPDLHAEPLPATTFTHCCLSAAHPRIGDSLSLQQYLAEHHLLASVTMRATEAAVLPIDRWLKSIGLPPRSCSVVYPIDRLAHVLSTTDRLATVAPIDGNDLRRRAPGLRLLPLPPELPRSWRPNYMVWHHRTHQSPPHRWLRERLREHVALDPVVAA*