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scnpilot_p_inoc_scaffold_14207_curated_2

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(1369..2754)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=795665 species="Bacteria; Pro similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 464.0
  • Bit_score: 872
  • Evalue 3.20e-250
rimO; ribosomal protein S12 methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 465.0
  • Bit_score: 794
  • Evalue 1.90e-227
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNZ4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 464.0
  • Bit_score: 872
  • Evalue 2.30e-250

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGAGTGAATCCACCGCAACCGCCCCGGGCGCCGTGCCCAAGGTGGGCTTCGTCAGCCTCGGCTGCCCCAAGGCGCTCACCGACGCCGAGCTGATCCTGACCCAACTGAGCGCCGAGGGCTACCAGACCTCCAAGTCCTACGACGGCGCCGACCTGGTCATCGTCAACACCTGCGGCTTCATCGACGACGCCGTGAAGGAAAGCCTGGACGCCATCGGCGAAGCCTTGGCCGAGAACGGCCGTGTCATCGTCACCGGCTGCCTGGGTGCGCGCGCAGGCGAAGAGGGCGGCAACCTGGTGCGCCAGATGCACCCCAGCGTGCTGGCCGTCACCGGCCCGCACGCCACGCACGAGGTGATGGAAGCGGTGCATCAGCACCTGCCCAAGCCACACGATCCCTTCGTGGACCTGGTGCCGCCGCAAGGCATCAAGCTCACGCCGCGCCACTACGCGTACCTCAAGATCAGCGAGGGCTGCAACCACCGCTGCACCTTCTGCATCATCCCGTCGATGCGCGGGGACCTGGTGAGCCGGCCCGTCGGTGACGTGCTGACCGAGGCGCGCAAGCTGTTCGAGGCGGGGGTGAAGGAGCTGCTGGTGGTGAGCCAGGACACCTCCGCCTACGGCGTGGACCTGAAGTACCGCACCGGCTTCTGGGATGGCCGGCCGGTGAAGACGCGCATGCACGACCTGGTGCGCGAATTGGGCGAGCTCGCCAAGCCCTTCGGCGCCTGGGTGCGCCTGCACTACGTTTATCCCTACCCGCACGTGGACGAAATCGTCCCGCTGATGGCCGAAGGCCTGGTGCTGCCTTACCTGGACGTGCCCTTGCAGCACAGCCACCCCGACGTGCTGCGCCGCATGAAACGGCCTGCCAGCGGTGAGCGCAACCTGGAGCGCATCGCGCGCTGGCGCGAGATCTGTCCGCAGATCGTCGTGCGCAGCACCTTCATCGCGGGCTTTCCCGGCGAGACCGAGGCCGAATTCGAGCACCTGCTCGATTTCCTGCGCGAGGCGCGCATCGACCGCGCCGGCTGCTTCGCGTATTCGCCGGTGGAGGGCGCCGCCGCCAATGGCTTGGCCGACCCGGTGCCCGAGGCGCTGCGCGAGGAGCGCCGCGCGCGCTTCATGGCCGTGGCCGAGCAGGTGTCGGCCGACAAGCTGCGCGCTCGCATCGGCGCCAACATGCAGGTGCTGGTGGACAGCGCGCCCGGCCTGGGCAAGAAGGGGGCCGTGGGCCGCAGCTACGCGGACGCGCCTGAAATCGATGGCGTGGTGCGGCTGCTGCCGCCCGAGAAGATCAGCAAGACGCTGAAGGTGGGCGAATTCACGCGGGCCCGTATTGTTGATACCGACGGTCACGACCTTGTGGCCTTGCCCGTTTGA
PROTEIN sequence
Length: 462
MSESTATAPGAVPKVGFVSLGCPKALTDAELILTQLSAEGYQTSKSYDGADLVIVNTCGFIDDAVKESLDAIGEALAENGRVIVTGCLGARAGEEGGNLVRQMHPSVLAVTGPHATHEVMEAVHQHLPKPHDPFVDLVPPQGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGDVLTEARKLFEAGVKELLVVSQDTSAYGVDLKYRTGFWDGRPVKTRMHDLVRELGELAKPFGAWVRLHYVYPYPHVDEIVPLMAEGLVLPYLDVPLQHSHPDVLRRMKRPASGERNLERIARWREICPQIVVRSTFIAGFPGETEAEFEHLLDFLREARIDRAGCFAYSPVEGAAANGLADPVPEALREERRARFMAVAEQVSADKLRARIGANMQVLVDSAPGLGKKGAVGRSYADAPEIDGVVRLLPPEKISKTLKVGEFTRARIVDTDGHDLVALPV*