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scnpilot_p_inoc_scaffold_1995_curated_6

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 5721..6659

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbL n=5 Tax=Gammaproteobacteria RepID=U3H4F6_PSEAC similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 324.0
  • Bit_score: 561
  • Evalue 7.60e-157
Conjugal transfer protein TrbL {ECO:0000313|EMBL:AIG04219.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 324.0
  • Bit_score: 561
  • Evalue 1.10e-156
trbL; conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 327.0
  • Bit_score: 552
  • Evalue 6.50e-155

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGCTGGCTTCCCCGAGGTGTTCGTGAACCTCGATGCCATCACGGTGATGTTCCTCGCCTGGCTGGTCGTGGTGCTGTGCTTCTTCGTGCTGGCGATCCAGCTTTTCATCACGCTGATCGAGTTCAAGCTGACCACGCTCGCCGGGTTCGTGCTGGTGCCGTTCGCGCTCTGGAACAAGACCTCGTTCCTGGCCGAGAAGGTGCTGGGCAACGTCGTGTCCGCCGGCGTCAAGGTGCTGGTGCTGGCCGTGATCGTCGGCATCGGTTCGGGCCTGTTCGCGCAGTTCCAAGTCCATCCCGCCGAGCCGTCCATCGACCACGCGCTGGTCATCATGCTGGCTTCGCTTACCTTGCTGGCGCTGGGGATCTTCGGCCCCGGCATCGCCACCGGTCTCGTGTCCGGTGCGCCGCAGCTCGGCGCGGGCGCGATGGTCGGCGCCGCCATCGGCGCGGCCGGAACGGCGGTGGCCGTCGGTGCAGCGGCTACGGGCGTCGGCGGCGCGGTGGCCGCCGGTGCGCGCATGGCCCCGGCCGCCGCCAAGCTGGCCGGCAGCGGCGCGCGTGCCGCCACGTCGGCGGCCGGCAGCGCGAAGTCGGCGTTCCAGGCCGGTTCCGCTGCCGCCGGCGGCGGCGCGAAGGGCGCGATGGCGGGCTTGGGCAACGTCGCCAAGACCGGCGCGAAGTCCGCCGGGCAGCGCATAGCCGCACCGTTCCGCGCTGGCTGGGATGGCGACGCCGGCGCGTCAGCCAGCCAGGCCGCCGCGAGTGAAGCCCCCGCCGGTGTCGCCGCACAGACGCCCGAGCAGCCCGCTTGGGCCAAGCGGCTGCACCGCCGCCAGCAACTCACCCAGGCCGCGACCACCGCCGCCCACGCGCTGCGCGGTGGCGATGGCGGCGGCTCTGGGCAAGGCCCGAGCCTGCGCGGCTCCGACGACTGA
PROTEIN sequence
Length: 313
MAGFPEVFVNLDAITVMFLAWLVVVLCFFVLAIQLFITLIEFKLTTLAGFVLVPFALWNKTSFLAEKVLGNVVSAGVKVLVLAVIVGIGSGLFAQFQVHPAEPSIDHALVIMLASLTLLALGIFGPGIATGLVSGAPQLGAGAMVGAAIGAAGTAVAVGAAATGVGGAVAAGARMAPAAAKLAGSGARAATSAAGSAKSAFQAGSAAAGGGAKGAMAGLGNVAKTGAKSAGQRIAAPFRAGWDGDAGASASQAAASEAPAGVAAQTPEQPAWAKRLHRRQQLTQAATTAAHALRGGDGGGSGQGPSLRGSDD*