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scnpilot_p_inoc_scaffold_179_curated_97

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(98241..99626)

Top 3 Functional Annotations

Value Algorithm Source
Efflux pump, RND family, outer membrane lipoprotein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q39ZX9_PELCD similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 457.0
  • Bit_score: 334
  • Evalue 1.70e-88
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 457.0
  • Bit_score: 334
  • Evalue 5.40e-89
Efflux pump, RND family, outer membrane lipoprotein {ECO:0000313|EMBL:ABA90328.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 457.0
  • Bit_score: 334
  • Evalue 2.40e-88

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Taxonomy

Pelobacter carbinolicus → Pelobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGAAACGGCTGATCCCGCTGGTTCTGCTGGCCGTCGGCGCCTGCGCCCAAGGCCCGGATTACGTCGCCCCCCAAGCCGACCTGCCCCAGGGCTGGAGCTTGCCTTACGCCACCGCGCCCCAGGGCCGCGAATGGTGGCAGGCCTTCGACGATCCGCAGGTCAGCGCTCTGGTGGTGCGCGCCTTGGCCGCCAATCCTGACCTGATGGCGGCGGAATCTGCGGTCCGTGCCGCCCGCGCCCTGGTGGACAAGGCGGCGGGCGGGACCTGGCCGCAAGTGGACGGCACCGCCGATGCCAGCCGCAGCCGCACGCCGGCCACCGAAACCGGTGGCACCAAGACCAAGGCCAAGACCGCCAACAGCTTCGGCCTGGGCTTCGATGCGTCGTGGGAACTGGACCTGTGGGGGCGTCTGGGACGACAGGTGGAGGCCGCCATGGCCACCGCCGAAGCCAGCCGGGCCGAAGCCGACGGGGTGCGTCTGACCCTGGTGGGCGACGTGGTGCGCAATTACGTGGAACTGCGGGGCTATCAGCTGCGCCTGCGGGTGGCCCGGGAAACCATGGAGTCTTATGCCGACACCGTGGGGCTGACCGAAGCCAAGTTCCAGGCCGGCACCGGGTCGGGGCTGGATCTGGCCCGCGCCCAGGCGCAACTGGCGTCGTCCAAGGCCGATTTGCCGCCGCTTCGGGCGGAATTGGCGGTCCGTCTGCATGCCCTGGGGGTACTGACCGGCCAACACCCCCAGGCCTTGGCCCAATTGCTGGATCAGCCGGGGACGGTGCCCAATATGGCGGCCGCCCCCGGTCTGGGGTTGCCCGCCGATCTGGTGCGCAACCGTCCCGACATCCGTCAGGCCGAACGCCAGCTGGCCGCCGCTACCGCCCAGATCGGCGTCGCCCAGGCTGATCTGTATCCGTCCCTGACCTTGTCGGGCTCGGTCGGTTTGTCGGCCGTTTCGGCGGGGACGTTGCTGGAAATGGCGGGGCGCACTTGGTCGTTCGGCCCCAGCTTGGTCCTGCCGCTGCTGGATGGCGGCACCCGACGGGCCGAGGTGGATTACCGTGTCGCCCTGGCCCAGCAGGCCGGTGAAACCTGGCGGTCCACCGTGTTGGCCGCCCTGGGCGAGGTCGAGGACAATCTGGCCGTCTGGGACCAGCAGGCTCGACGCGTTCAGGCCTTGGAATTGGCGGTGGCCACCAGTCGGGCTGCGCTGGAACTGGCGACCGAGCTGAATGACAAGGGCATGAGTTCGTATCTGGACGTGCTGGACGCCATGCGCGAACTGCGCAGCCTGGAAGCTCAACTGGCCGAGGCCCAGGTCCAGGCGGTCACCGATCTGGTGAGCCTTTATAAATCCTTGGGCGGCGGGGCGCCGTTTTCCTGA
PROTEIN sequence
Length: 462
MKRLIPLVLLAVGACAQGPDYVAPQADLPQGWSLPYATAPQGREWWQAFDDPQVSALVVRALAANPDLMAAESAVRAARALVDKAAGGTWPQVDGTADASRSRTPATETGGTKTKAKTANSFGLGFDASWELDLWGRLGRQVEAAMATAEASRAEADGVRLTLVGDVVRNYVELRGYQLRLRVARETMESYADTVGLTEAKFQAGTGSGLDLARAQAQLASSKADLPPLRAELAVRLHALGVLTGQHPQALAQLLDQPGTVPNMAAAPGLGLPADLVRNRPDIRQAERQLAAATAQIGVAQADLYPSLTLSGSVGLSAVSAGTLLEMAGRTWSFGPSLVLPLLDGGTRRAEVDYRVALAQQAGETWRSTVLAALGEVEDNLAVWDQQARRVQALELAVATSRAALELATELNDKGMSSYLDVLDAMRELRSLEAQLAEAQVQAVTDLVSLYKSLGGGAPFS*