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scnpilot_p_inoc_scaffold_179_curated_101

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 102559..103119

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4L1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 184.0
  • Bit_score: 307
  • Evalue 1.20e-80
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CDK97322.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 184.0
  • Bit_score: 307
  • Evalue 1.70e-80
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 183.0
  • Bit_score: 186
  • Evalue 7.30e-45

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGATTTCCGATCAGGAGCTGCTGGTCGCCACCGGCCAAGGTGACCGCGCAGCCTTCGCCCAACTGATGGAACGGCACACGCCCTTTGCCCTGGCTTTGGGCATGCGCATGCTGGGGAATTCCGACGACGCCGAGGAAGTGGCGCAGGAAGCGTTTCTGCGCGTCTGGCGCAAGGCGCCCGATTGGGACGGCGACGGCGGCGCCCAATTCACCACCTGGCTTTACCGGGTGGTGATCAATCTGTGTACCGACCGCAAGCGCCGCCGCCCCATGTTGCCCATGGACGACGTCGAGGAACCGGCCGACCCCGCCCCTGACGGATTGGACCATGTGGCCCGATCCCAGGCGCAGAAGATGGTGAGCGACGGATTGGCCCAGTTGCCGGAACGTCAGCGTGCCGCCATCAGCCTGTGCCATCTGGGCGAGGTCAGCAACGCCGAGGCCGCCCAGGTTCTGGGGGTCACCGTCTCGGCCCTGGAATCGCTTTTGGTCCGCGGCCGCCGCGGACTTCGAGATTACTTGTCGCGGCTGGGATTCGCCGCATCAGGAGACTTGCTATGA
PROTEIN sequence
Length: 187
MISDQELLVATGQGDRAAFAQLMERHTPFALALGMRMLGNSDDAEEVAQEAFLRVWRKAPDWDGDGGAQFTTWLYRVVINLCTDRKRRRPMLPMDDVEEPADPAPDGLDHVARSQAQKMVSDGLAQLPERQRAAISLCHLGEVSNAEAAQVLGVTVSALESLLVRGRRGLRDYLSRLGFAASGDLL*