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scnpilot_p_inoc_scaffold_731_curated_11

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 14144..14647

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9VZ98_METEP similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 172.0
  • Bit_score: 159
  • Evalue 2.70e-36
DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein {ECO:0000313|EMBL:KIL98685.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 165.0
  • Bit_score: 212
  • Evalue 6.50e-52
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 172.0
  • Bit_score: 159
  • Evalue 8.60e-37

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Taxonomy

Magnetospirillum magnetotacticum → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGGCCGACAGCCAAATAGAGGCCCAAATTCCCGGCCTGCGCCGTTATGCCCGCGCCCTTTGCGCCGGCGACGCGGCGCAGGCCGACGACCTGGTCCAGGATTGCCTGGAACGCGCGCTTTCGCGCTGGGCGTCGTGGCGCGGCGAGTCCGAGCTGCGGCTGTGGCTGTTGGCCATCTTGCGCAATCTGTGGCTGGACGAGGTGCGCCGTCGCGGGGCGCGGCCCGATCTGGTGGATGTGGACGATTGCCCCGATTCCCTGGCGGTGCCCCCCAGCCAAGGACAGGCCTTGGTTCTGCGGGATTTGGCCGGGGCCTTGGGGCGGCTGGCCCCGGAACAGCGTGAAGTGCTGGTTCTGGTGGGATTGGAAGGGTTGAGTTACGCCCAGGTGGCCCAGGTGACCGGGACACCCATGGGCACGGTGATGTCGCGGCTGAAACGGGGCCGCGACCGTCTGGCCCAGCTGATGCGCGAGGACGGGCCGGCACTTCGGAGGGTGAAATGA
PROTEIN sequence
Length: 168
MADSQIEAQIPGLRRYARALCAGDAAQADDLVQDCLERALSRWASWRGESELRLWLLAILRNLWLDEVRRRGARPDLVDVDDCPDSLAVPPSQGQALVLRDLAGALGRLAPEQREVLVLVGLEGLSYAQVAQVTGTPMGTVMSRLKRGRDRLAQLMREDGPALRRVK*