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SCNpilot_expt_1000_bf_scaffold_1291_curated_27

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(25135..26322)

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L4S3_FRASN similarity UNIREF
DB: UNIREF100
  • Identity: 34.4
  • Coverage: 421.0
  • Bit_score: 201
  • Evalue 1.50e-48
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 34.4
  • Coverage: 421.0
  • Bit_score: 201
  • Evalue 4.70e-49
Integrase family protein {ECO:0000313|EMBL:ABW14888.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.4
  • Coverage: 421.0
  • Bit_score: 201
  • Evalue 2.10e-48

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGTCTCGCGGAGCGAAGGGCGAAGGGTCGGTCTACGAGTACCGAGACGGCTATCGCGCGTACGTGACCGTCAAGGGGAAGCGGAAGTACTTCTACTTCAAGGGCGTCACCAAATCTGAGGCCGCGCGGATGCTGCGAGTGCGCCTCAACCAGCGCGACGACGGTTCCTTGCCCCGTGGGAAGGATCTGACCGTGGCTGCGTGGATGCGCCACTGGGTGAAGACGGCCGACCTTACTCCGCGCACTCGCTATGTGTACGACCGCACCGTGGAAGCCTATGTCGTGCCCGGCATCGGGCACATCCGACTGTCAGAACTGGAACCGGAAGACCTCGAAGAGTTCTACGCCGCGTTTCAGGCCGGCGCGTTCTCACACCTGACGCTGAACAAGGCGACGAACAAGCGCGAGCGGAAGGCACCTGGATCGCACGCTCTGCGGAACGTGCACGCCAACATTCGCGCGGCGCTGAACGTAGCCGTGAAGCGTCGACGTGTTGCGCGCAACGTCGCCCTTGCTGTTGAACTGCCGCGCGCTGAGCACGCCGAGATGCGCACTATGAGCACGACGGATGCCCGCCGCGTGATTGCCGCCGCCATGGAGCGCCCTGATGCCGCACGGTGGTATCTCGCGCTCGTCTATGGCCTGCGCCCTTCCGAGCTGCTCGGCCTCGAGGCGTCCCATCTTGACCGCGGCGCTGGCGTGGTGCGCGTGCGCCAGCAGCTTGCGCGGGTCGTCGGCGAGGGGATGCGGATCCTGCCTTACACGAAGACGGATGCCGGGCGGCGAGACATCCCCGTTCCGGAAGCAGTCATCAAGCTCATCGATCGCGCCATCGAACGCCGAATGCAGATGCGCCTCGAGTACGGCGCCCGCTATGTGGAGTGGGAGAACGACGGGGAGCCCACCTCGCTCCTGTTCACCCAGGATGACGGGACGCCGATCGACTCGAATGTGCACCGTCGAGCATGGCGCGAGCTGCTGGCATCGGTTGGCGTTCCTGCCGAGCGCCCGTACATCGGCAGGCACACCGCCGCGTCGGTGATGATCGAGATGGGGATGGATATCGCGGTCGTATCCTCAATCCTCGGCCACAAGAAGACATCGTTCACCTACGACACGTACGTGCATCCGATGATGGATGCGAAGAAATCCGCCGCGGACGCACTGGCCTCCGCATACGGGCTCTGA
PROTEIN sequence
Length: 396
MSRGAKGEGSVYEYRDGYRAYVTVKGKRKYFYFKGVTKSEAARMLRVRLNQRDDGSLPRGKDLTVAAWMRHWVKTADLTPRTRYVYDRTVEAYVVPGIGHIRLSELEPEDLEEFYAAFQAGAFSHLTLNKATNKRERKAPGSHALRNVHANIRAALNVAVKRRRVARNVALAVELPRAEHAEMRTMSTTDARRVIAAAMERPDAARWYLALVYGLRPSELLGLEASHLDRGAGVVRVRQQLARVVGEGMRILPYTKTDAGRRDIPVPEAVIKLIDRAIERRMQMRLEYGARYVEWENDGEPTSLLFTQDDGTPIDSNVHRRAWRELLASVGVPAERPYIGRHTAASVMIEMGMDIAVVSSILGHKKTSFTYDTYVHPMMDAKKSAADALASAYGL*