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SCNpilot_expt_1000_bf_scaffold_767_curated_8

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(5165..6664)

Top 3 Functional Annotations

Value Algorithm Source
mmsA; methylmalonate-semialdehyde dehydrogenase MmsA (EC:1.2.1.27) similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 498.0
  • Bit_score: 765
  • Evalue 7.80e-219
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000370B830 similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 491.0
  • Bit_score: 810
  • Evalue 8.80e-232
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EYT60274.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 499.0
  • Bit_score: 826
  • Evalue 2.20e-236

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Taxonomy

Microbacterium sp. UCD-TDU → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGACTCGTTTCATCCCCCATTTCGTAGGCGGAAAGTCGCTCGAGCCCACCGGCGGGCGCGTCGCCGACGTGTTCGATCCGAGCACCGGAGAGGTGCAGGCGCGTGTCCCGCTGGCTACGGCGGACGAGGTGCGCGCGGTCATCGAGAACGCCGCCGCCGCGCAGCCGGCGTGGGCCGCCACCAACCCGCAGAAGCGCGCCCGCGTGATGATGCGCTTCGTCGAGCTCGTGCACCGGAACATGGACGAACTGGCCGCCCTGCTCTCCAGCGAGCACGGCAAGACCTTCGAAGACGCCAAGGGCGACATCATCCGCGGACTCGACGTGATCGAGTTCTGCATCGGCGCCCCGCACATGCTGAAGGGCGAGTACTCCACCGAGGTCGGCACCGGCATCGACGTGTACTCGATGCGCCAGCCGCTCGGCGTGGTGGCCGGCATCACCCCGTTCAACTTCCCGGCCATGATCCCGCTGTGGAAGGCCGGTCCCGCGATCGCCAGCGGCAACGCCTTCGTGCTCAAGCCCTCCGAGCGCGACCCCTCCGTCCCCGTGCGGCTCGCCGAGCTGTTCCTCGAGGCGGGGTTGCCCGCGGGCATCCTCAACGTCGTCCACGGCGACAAGGTGGCGGTCGACACGATCCTCACCGACCCGCGCATCCAGGCCGTCGGGTTCGTCGGATCCACGCCCATCGCGGAGTACATCTACTCGACCGCCGCCGCCAACGGCAAGCGCGCGCAGTGCTTCGGCGGCGCGAAGAACCACCTGATCGTGCTGCCCGACGCCGATCTCGACCAGGCCGCCGACGCGCTGATCGGCGCCGGCTTCGGCTCGGCAGGCGAACGCTGCATGGCCATCTCGGTGGCCGTCCCGGTGGGCGAGGAGACCGCCGACGCCCTGGTCGCGAAGATCTCCGAGCGCCTGGGCGAGCTGAAGGTCGGCCCCGGGATGCAGGACGGCGTCGACTACGGCCCCCTGGTCTCCGCCGCGTCGAAGGCCCGCGTCGAGGGCCTCATCCAGGAGGGCGTCGATGCCGGTGCCACGCTCGTCGCCGACGGTCGCGGGCTGGTGGTCGAGGGCTACGAGAACGGCTACTACCTCGGGCCCACCCTGTTCGACCACGTCACCACCGACATGTCGATCTACCGCGAGGAGATCTTCGGCCCGGTGCTCTCGGTGGTCCGCGCGGCGGACTACGAGGAGGCTCTGGCCCTGGCATCCGACAACCCCTACGGCAACGGCGTCGGCATCTTCACCCGCGACGGCGACGCCGCCCGCGACTTCGCGGCTCGCGTGAACGTCGGGATGGTCGGTGTCAACGTCCCGATCCCGGTGCCGATCGCCTACTTCACCTTCGGCGGCTGGAAGGCGTCCGGGTTCGGCGACCTGAACCAGCACGGAGCCGACGGCTTCCGCTTCTACACGAAGACCAAGACCGTGACCAGCCGCTGGCCGTCGCATGGCGTGCGCGAAGGCGCCAGCTTCGTCATGCCCACGATGTGA
PROTEIN sequence
Length: 500
MTRFIPHFVGGKSLEPTGGRVADVFDPSTGEVQARVPLATADEVRAVIENAAAAQPAWAATNPQKRARVMMRFVELVHRNMDELAALLSSEHGKTFEDAKGDIIRGLDVIEFCIGAPHMLKGEYSTEVGTGIDVYSMRQPLGVVAGITPFNFPAMIPLWKAGPAIASGNAFVLKPSERDPSVPVRLAELFLEAGLPAGILNVVHGDKVAVDTILTDPRIQAVGFVGSTPIAEYIYSTAAANGKRAQCFGGAKNHLIVLPDADLDQAADALIGAGFGSAGERCMAISVAVPVGEETADALVAKISERLGELKVGPGMQDGVDYGPLVSAASKARVEGLIQEGVDAGATLVADGRGLVVEGYENGYYLGPTLFDHVTTDMSIYREEIFGPVLSVVRAADYEEALALASDNPYGNGVGIFTRDGDAARDFAARVNVGMVGVNVPIPVPIAYFTFGGWKASGFGDLNQHGADGFRFYTKTKTVTSRWPSHGVREGASFVMPTM*