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SCNpilot_expt_1000_bf_scaffold_767_curated

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_767_curated_1
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..517
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349D1A9
MarR family protein {ECO:0000313|EMBL:KJL23043.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_767_curated_2
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

517..963
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349958E
Uncharacterized protein {ECO:0000313|EMBL:KJL36473.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_767_curated_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1021..1464
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K500_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL36474.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_767_curated_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1698..2147)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI0003650B68
Uncharacterized protein {ECO:0000313|EMBL:KJL21936.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_767_curated_5
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2144..2920)
DNA (777bp) protein (259aa)
Putative enoyl-CoA hydratase echA8 {ECO:0000313|EMBL:KJL20325.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJL20325.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
enoyl-CoA hydratase n=1 Tax=Microbacterium barkeri RepID=UPI00030F3F70
echA8_1; enoyl-CoA hydratase/carnithine racemase
SCNpilot_expt_1000_bf_scaffold_767_curated_6
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3028..3933)
DNA (906bp) protein (302aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347733D
SCNpilot_expt_1000_bf_scaffold_767_curated_7
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3930..5117)
DNA (1188bp) protein (396aa)
fadE; acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJP2_9MICO
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_767_curated_8
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5165..6664)
DNA (1500bp) protein (500aa)
mmsA; methylmalonate-semialdehyde dehydrogenase MmsA (EC:1.2.1.27)
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000370B830
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EYT60274.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
SCNpilot_expt_1000_bf_scaffold_767_curated_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6911..9721
DNA (2811bp) protein (937aa)
Immune inhibitor A {ECO:0000313|EMBL:KJL33980.1}; EC=3.4.24.- {ECO:0000313|EMBL:KJL33980.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
M6 family metalloprotease domain-containing protein; K09607 immune inhibitor A [EC:3.4.24.-]
protease n=1 Tax=Agromyces italicus RepID=UPI0003B4C9F3
SCNpilot_expt_1000_bf_scaffold_767_curated_10
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10072..11757
DNA (1686bp) protein (562aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003654F34
RCC1 repeat domain protein, 2 domains {ECO:0000313|EMBL:KJY65130.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
regulator of chromosome condensation, RCC1
SCNpilot_expt_1000_bf_scaffold_767_curated_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12960..13457
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL31193.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCNpilot_expt_1000_bf_scaffold_767_curated_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13482..14120)
DNA (639bp) protein (213aa)
Transcriptional activator FtrA {ECO:0000313|EMBL:KJL30772.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCNpilot_expt_1000_bf_scaffold_767_curated_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14740..20667)
DNA (5928bp) protein (1976aa)
alpha-1,6-glucosidase (EC:2.4.1.19 3.2.1.41)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036288E5
Alpha-1,6-glucosidase {ECO:0000313|EMBL:EXJ51313.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_1000_bf_scaffold_767_curated_14
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21282..22310)
DNA (1029bp) protein (343aa)
Protein phosphatase 2C domain-containing n=1 Tax=Nocardioides sp. CF8 RepID=R7XUU9_9ACTO
Protein phosphatase 2C domain-containing {ECO:0000313|EMBL:EON23109.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
serine/threonine protein phosphatase
SCNpilot_expt_1000_bf_scaffold_767_curated_15
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22518..23489
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000313D821
Uncharacterized protein {ECO:0000313|EMBL:KJQ55138.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_767_curated_16
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23562..24740)
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
acetyl-CoA acetyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI00030E7D09
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89243.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
SCNpilot_expt_1000_bf_scaffold_767_curated_17
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24816..25733)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003784F75
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89276.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
galactose mutarotase
SCNpilot_expt_1000_bf_scaffold_767_curated_18
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25730..26977)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E51B7C
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89272.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
fad linked oxidase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_767_curated_19
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27038..28192)
DNA (1155bp) protein (385aa)
transcriptional regulator n=1 Tax=Agromyces italicus RepID=UPI0003B66446
N-acetylglucosamine repressor {ECO:0000313|EMBL:KJL33806.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator/sugar kinase
SCNpilot_expt_1000_bf_scaffold_767_curated_20
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28275..30680)
DNA (2406bp) protein (802aa)
Periplasmic beta-glucosidase {ECO:0000313|EMBL:KJL21955.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KJL21955.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glycoside hydrolase family protein; K05349 beta-glucosidase [EC:3.2.1.21]
beta-glucosidase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00038113F9
SCNpilot_expt_1000_bf_scaffold_767_curated_21
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30684..31580)
DNA (897bp) protein (299aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E597_9MICO
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJL33803.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
putative ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_expt_1000_bf_scaffold_767_curated_22
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31577..32590)
DNA (1014bp) protein (338aa)
sugar ABC transporter permease n=1 Tax=Promicromonospora sukumoe RepID=UPI0003771A31
L-arabinose transport system permease protein AraP {ECO:0000313|EMBL:KJL33802.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein
SCNpilot_expt_1000_bf_scaffold_767_curated_23
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32598..33893)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1YZN4_9BACI
Multiple sugar-binding protein {ECO:0000313|EMBL:KJL33801.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_767_curated_24
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34032..35030
DNA (999bp) protein (333aa)
LacI family transcriptional regulator n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B5B205
HTH-type transcriptional repressor CytR {ECO:0000313|EMBL:KJL33800.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_767_curated_25
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35107..36297
DNA (1191bp) protein (397aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
xylA; xylose isomerase; K01805 xylose isomerase [EC:5.3.1.5]
xylose isomerase n=1 Tax=Leifsonia sp. 109 RepID=UPI00035CEDF3
SCNpilot_expt_1000_bf_scaffold_767_curated_26
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36350..37651
DNA (1302bp) protein (434aa)
Xylulose kinase {ECO:0000313|EMBL:KJQ55142.1}; EC=2.7.1.17 {ECO:0000313|EMBL:KJQ55142.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
xylulokinase; K00854 xylulokinase [EC:2.7.1.17]
xylulokinase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036ED1F9
SCNpilot_expt_1000_bf_scaffold_767_curated_27
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37676..39193)
DNA (1518bp) protein (506aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
araA; L-arabinose isomerase; K01804 L-arabinose isomerase [EC:5.3.1.4]
arabinose isomerase n=1 Tax=Microbacterium barkeri RepID=UPI00030EAA2E
SCNpilot_expt_1000_bf_scaffold_767_curated_28
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39205..40791)
DNA (1587bp) protein (529aa)
Sugar (Pentulose and hexulose) kinase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YLI7_9MICO
ATPase {ECO:0000313|EMBL:KDA06703.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
araB; sugar (pentulose and hexulose) kinase
SCNpilot_expt_1000_bf_scaffold_767_curated_29
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40788..41552)
DNA (765bp) protein (255aa)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:KJL23030.1}; EC=5.1.3.4 {ECO:0000313|EMBL:KJL23030.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
ribulose-5-phosphate 4-epimerase; K01786 L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377D27D
SCNpilot_expt_1000_bf_scaffold_767_curated_30
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41721..42737)
DNA (1017bp) protein (339aa)
LacI family transcriptional regulator n=1 Tax=Agromyces italicus RepID=UPI0003B4272D
Lactose operon repressor {ECO:0000313|EMBL:KJL23029.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
LacI family transcriptional regulator
Displaying items 1-30 of 69 in total

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