ggKbase home page

SCNpilot_expt_1000_bf_scaffold_767_curated_10

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 10072..11757

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003654F34 similarity UNIREF
DB: UNIREF100
  • Identity: 28.4
  • Coverage: 496.0
  • Bit_score: 128
  • Evalue 3.00e-26
RCC1 repeat domain protein, 2 domains {ECO:0000313|EMBL:KJY65130.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 26.3
  • Coverage: 600.0
  • Bit_score: 137
  • Evalue 6.80e-29
regulator of chromosome condensation, RCC1 similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 400.0
  • Bit_score: 126
  • Evalue 2.10e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium asteroides → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1686
ATGCAAGACCACGTTGCGAGGCAAACCACCCAACCGCTCAAGAATGCGGGACCGACCCGGCGAACGGTCATCCAGGCGGCGGCATGGTCCGTGCCGGTCATGTCCGCCGCAGTCGCCGTGCCACTCGCGGCGGCGTCGGTGGTGGTGGATGGTCTCTCCATCCGATTCACTCGGTCCCGCTACCAGACCACTCCGGACAACGCTTCCTACTCCGAAGTCACCGCCGTCGTCGAGCGGACTTCGGGCGGCAACACGGCCCCGGTGCCGGGTGCGAACATCCCCTTCACGCTTTCCGCACTCCCCGCCGGCACCACTCCTCCGGCACTGCCGAGCGGCGCAACGACACTGACTGCCGGCCCGCAGGCGGTCGCGGCGGCCGCAGCGACCAATGGGCAGGCTCCGTCAGCGAAGCTCCCCAACGGACTGCAGATCGCGACGCTTGGAACCACGGATGCCTCGGGCGCCTATGTTGTCGCCCCGATCAGCACGGGTCCGGGGTGGGGCTGGGTCAAGCTGAGCGCCTCCACCACTGTGAGCGGCGAGACCGCAACGGCGGAGACCTACATCGAGATCACCATCAAGGGACCAGTCTTCAGCTTCGGAGCGCCGAACGCCGGCGGGCTCGGGAACGGGAACAGCGGGTTCCAGCCCCTGCCGACCTACGTGAACCATCCGGAGTTCGACGTCGTCGCGATCTCGGCGCGCGTCGACTACGGCGCCGCGCTTCTCACCAGCGCGGGCGAGATCTTCTCGTGGGGCAGCGGCTACCAGGGCGCGAATGCGCAGGGCGGCACCGATCAGTCCACGCTGTGGACGCCTGCGAAGATCGTCACGGCGTATGCCGGGCAGACTTTCACCTCGCTCTCCCGTGGGAGCCGCTACAACCAGGGCGCCATCGACTCGAACGGCGGCGCGTACGGCTGGGGCTGGAACACTTTCGGCACCCTCACCGGCGGCTCGACTGCGCCCATCGGCGTCTTCACTCCGAAGCTCATCCACGATTCGCTCAAGTCGGGCGTGAAGAAGCTCGTGATGAACGACTGGACCGGGTACGCCCTGAAGGACGACGGCACCGTCTGGTCGTGGGGATTCAACTACGAGGGTTCGCTCGGACTGGCCTCGAAGGCGATCGGGGCCTACACGACGCAGCCCGAGCAGGTGGTCTTCCCCGGGAACGTCAAGATCACCGACATCGCCGCAGGATGGGCGGCCGCATACGTCGTCGACGAGAACGGGCACCTGTGGGGCTGGGGTTCCGGTGCGGGGAATCGCCTGGGCCAGGGCGCGGATCTCACTTGGCGCACTACCCCGACGCGGATCGGCAACGACACGGACGTCTACGCCTCGGTGTACTCGAACAGCTACACCTATGCGGCGGGCGCCGTGCGGACGGACGGAACCGGCGTGTACTGGGGATACAACGCCTTCGGCCAGGCCGGATTCAGCGGCGCGACGAACACACCGACCGCGGTTCCGCTGCAGGGCGTCGCCCAGCTCGAGATCGGCACCTACGGCACCTACGCCCGTCTGACCAACGGCGACGTGTATTACTCCGGATGGGGCGGCTGGGGCCAGGGCGGCAGTGGTGAATACACCGCCGAGGCGAAGTTCCGCAAGGCTGTCAATCTCGATGGCCCTGCCAAGGACATCGCTGCGACGTTCACGGCCGGGTTCGTCCTGGTCTGA
PROTEIN sequence
Length: 562
MQDHVARQTTQPLKNAGPTRRTVIQAAAWSVPVMSAAVAVPLAAASVVVDGLSIRFTRSRYQTTPDNASYSEVTAVVERTSGGNTAPVPGANIPFTLSALPAGTTPPALPSGATTLTAGPQAVAAAAATNGQAPSAKLPNGLQIATLGTTDASGAYVVAPISTGPGWGWVKLSASTTVSGETATAETYIEITIKGPVFSFGAPNAGGLGNGNSGFQPLPTYVNHPEFDVVAISARVDYGAALLTSAGEIFSWGSGYQGANAQGGTDQSTLWTPAKIVTAYAGQTFTSLSRGSRYNQGAIDSNGGAYGWGWNTFGTLTGGSTAPIGVFTPKLIHDSLKSGVKKLVMNDWTGYALKDDGTVWSWGFNYEGSLGLASKAIGAYTTQPEQVVFPGNVKITDIAAGWAAAYVVDENGHLWGWGSGAGNRLGQGADLTWRTTPTRIGNDTDVYASVYSNSYTYAAGAVRTDGTGVYWGYNAFGQAGFSGATNTPTAVPLQGVAQLEIGTYGTYARLTNGDVYYSGWGGWGQGGSGEYTAEAKFRKAVNLDGPAKDIAATFTAGFVLV*