ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_1000_bf_scaffold_767_curated_22

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(31577..32590)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter permease n=1 Tax=Promicromonospora sukumoe RepID=UPI0003771A31 similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 309.0
  • Bit_score: 466
  • Evalue 2.80e-128
L-arabinose transport system permease protein AraP {ECO:0000313|EMBL:KJL33802.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 337.0
  • Bit_score: 564
  • Evalue 1.40e-157
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 334.0
  • Bit_score: 448
  • Evalue 1.90e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGACCGACACGCAGGCACTGCAGAGCACGACGGTGCCTGAGAGGATCGCCGTCCCTGGAGCGGGCCCCGCGCCCGCTCCGGGGCGGCGCTCGCCGCGGCCCGACTGGCGCAAGCGCGGCGAGATCGCGCTCCTCTCGGGACCGGCTCTCATCATGTTCGTCGGCTTCGTCATCCTCCCGGTGGCGATGGCCGCGTTCTACGGCTTCTTCAAGTGGAACGGCTTCGGCTGGCCGACGGAGTTCATCGGGCTCGACAACTACCGCATGATGTGGGAGGACGAGACCTTCCGGCAGGCGGTGCTGCACAACGGCGTCATCGTCGTGCTCTCACTGCTGCTGCAGGGGCCGGTGGCCATCCTGTTCGCGCTGCTGCTGAACCAGAAGATCCGCGGCAGGTCCATCATCCGGGTGCTGATCTTCGTGCCCTACGTCATCTCGGAGGTCATCGTCGGCATCGGCTGGAGCCTGATGCTGCAGGACGCCGGCGCGCTGAACTCCCTGCTGGAGAAGTGGGGACTCGGGTTCCTGCAGCAGTCCTGGATCGCGGACCCCTCGATCGCGATGGGCTCGCTGATGATCATCATCACCTGGAAGTACCTCGGCTTCGCAGTGATCCTCATGCTCGCCGGCATGCAGTCGATCCCGGAGGAGCTGTACGAGGCCGCCGCGATCGACGGCGCCGGATTCTGGAAGATCCAGTGGAGCATCACGGTGCCCCTCCTGGGGCCGACCATCCGGATCTGGGCGTTCCTGTCCATCATCGGCTCGCTGCAGCTCTTCGACCTGGTCAACATCATCTGGGGCCAGTACATCGCCGCGACCGCCGGCACCTCCACGATGGCGACCTACATGTACCAGAACGGCCATCTGGCCGGCAGCTACGGATACGGCAACGCCGTCGCGGTGATGCTCTTCCTGATCACCCTGATCGTGGCTCTCGTCTATCAGCGCTTCGTGCTGCGTCGTGACACCGATGGTGCGCTGACCGGCGACGGCGGAAGGAGGCGCAAGTGA
PROTEIN sequence
Length: 338
MTDTQALQSTTVPERIAVPGAGPAPAPGRRSPRPDWRKRGEIALLSGPALIMFVGFVILPVAMAAFYGFFKWNGFGWPTEFIGLDNYRMMWEDETFRQAVLHNGVIVVLSLLLQGPVAILFALLLNQKIRGRSIIRVLIFVPYVISEVIVGIGWSLMLQDAGALNSLLEKWGLGFLQQSWIADPSIAMGSLMIIITWKYLGFAVILMLAGMQSIPEELYEAAAIDGAGFWKIQWSITVPLLGPTIRIWAFLSIIGSLQLFDLVNIIWGQYIAATAGTSTMATYMYQNGHLAGSYGYGNAVAVMLFLITLIVALVYQRFVLRRDTDGALTGDGGRRRK*