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SCNpilot_expt_1000_bf_scaffold_1484_curated_16

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(12559..12867)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein ArsR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKM7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 89.0
  • Bit_score: 77
  • Evalue 1.10e-11
ArsR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 92.0
  • Bit_score: 79
  • Evalue 9.10e-13
Regulatory protein ArsR {ECO:0000313|EMBL:AEA23234.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 89.0
  • Bit_score: 77
  • Evalue 1.50e-11

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGGGGCAGAACCAGGTGTTCACCGCGGTCGCGGATCCGACGCGACGCGCGATCCTCACGACTCTGCGGGAGCGCGATGAGATCTCGGTCGGCGAGATCGCGGAGCTCTTCCCCGGTATGACGCGCGCGGCCGTGTCGGCGCATCTGCGGGTGCTGCGGGACTCGGATCTCGTCGCCGAAGAGCGCCGCGGCCAGCGGCGCATGTATCGTCTCGGCCCCAACCGGGCCGACGAGATCATCCAGTTCTTGATGAAGGTCTACGCCGACGGCGTTGAGGCCTTCGTCCGAAACAACCAGACCGGCGAGTGA
PROTEIN sequence
Length: 103
MGQNQVFTAVADPTRRAILTTLRERDEISVGEIAELFPGMTRAAVSAHLRVLRDSDLVAEERRGQRRMYRLGPNRADEIIQFLMKVYADGVEAFVRNNQTGE*