ggKbase home page

SCNpilot_expt_1000_bf_scaffold_864_curated_63

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(60984..61643)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=2 Tax=Microbacterium barkeri RepID=UPI00031DF249 similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 219.0
  • Bit_score: 369
  • Evalue 2.30e-99
Oxygen regulatory protein NreC {ECO:0000313|EMBL:KJQ53991.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 219.0
  • Bit_score: 382
  • Evalue 4.80e-103
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 220.0
  • Bit_score: 310
  • Evalue 5.20e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGAGTGACAGCATCCGCGTGGTGATCGTCGACGACCACTCGATCTTCCGCTCCGGCCTGCGCGCCGACCTCGACGAGACCGTCGAGGTCGTGGGCGAGGCCGCGGACGTGCCCTCGGCGATCGCCGTGATCCGCGAGACGATGCCGGACGTCGTACTCCTGGATGTGCATCTTCCGGGCGGCGCGGGCGCGGAGGCCACGGGCGGCGAGTCCGTGATCCGCGGCTCTGCTCCGACGACCGCGCGCTTCCTCGCGCTGAGCGTCTCGGATGCTGCGGAGGACGTGGTGCGGGTGATCCGCGCCGGCGCCCGCGGGTACATCACGAAGGGCTCATCGGGCGTGGAGGTCTCCAAGGCCGTGCACGCCGTCGCGGGCGGGGATGCGGTGTTCTCGCCGCGTCTGGCGGGCTTCGTGCTCGACGCCTTCGGTGCGGTGGCCGGCGAGACGGCCGCGGTGGACGACGAGCTCGACCGGCTCTCGGCACGCGAGCAGGAGGTCATGCGACTGATCGCGCGCGGCTACGCCTACAAGGAGGTCGCCGTGGAGCTGTTCATCTCGATCAAGACCGTGGAGACCCACGTGTCCGCGGTGCTGCGCAAGCTGCAGCTCTCCTCGCGACACGAGCTCACGGTCTGGGCATCCGAGCGCCGGCTGCTGTGA
PROTEIN sequence
Length: 220
MSDSIRVVIVDDHSIFRSGLRADLDETVEVVGEAADVPSAIAVIRETMPDVVLLDVHLPGGAGAEATGGESVIRGSAPTTARFLALSVSDAAEDVVRVIRAGARGYITKGSSGVEVSKAVHAVAGGDAVFSPRLAGFVLDAFGAVAGETAAVDDELDRLSAREQEVMRLIARGYAYKEVAVELFISIKTVETHVSAVLRKLQLSSRHELTVWASERRLL*