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scnpilot_p_inoc_scaffold_852_curated_24

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(21307..22191)

Top 3 Functional Annotations

Value Algorithm Source
transposase IS401 n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003602B30 similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 246.0
  • Bit_score: 324
  • Evalue 1.50e-85
Integrase {ECO:0000313|EMBL:KGN35085.1}; Flags: Fragment;; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 225.0
  • Bit_score: 324
  • Evalue 2.10e-85
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 231.0
  • Bit_score: 317
  • Evalue 4.40e-84

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Taxonomy

Knoellia aerolata → Knoellia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 885
GTGCTCACCGAGCATGGGGTCCAGATCGCTCCGTCCGGTTACTACGCGTTCAAGACCCGCCCCGTCTCAGCGCGAGCCGTTCGGGATGCCGAGCTGATCGTGCAGATCGAGCGGGTGTTCTGGGACCGGAAACTCGGCCGCGGGATCAGCGGCGTCCGCAAGGTCTGGCATCTGCTGCGGCGAGAGGGGATCCTCGTGGCCCGCTGCACCGTCGAGCGGCTCATGCGCCAGCAGGGCTTGCGCGGCATCCGGCGGGGCAAGCAGTTCGTCACCACCCGACCTGACGATGCCGCCACTCGGCCGCCGGACCACGTGCAACGCTGCTTCCGCGCGGACCGGCCCAACGAGCTCTGGGTCGTCGACTTCACCTACGTCCCGACGTGGTCGGGCATGGCGTTCACGGCGTTCGTCACCGATGTGTTCTCCCGCCGGATCGTCGGGTGGCGCACGATGTCGAAGATGCCCACCGACCTGCCGCTGGACGCGCTCGAGATGGCGCTGTGGGTGCGGGACCGCGCCGGCGAGGACGTCACCGGCGTCATCCAGCACTCCGACGCCGGGTCCCAGTACACCGCGTTGCGGTACTCCGAGCGGCTCGCGGACGTCGGCGCGATCGCGTCGATCGGAACCGTCGGCGATTCGTATGACAACGCCCTGGCTGAGACGGTCGTGGGCCTCTACAAAACCGAGTGCGTGAAGGTCGACGGCCCATTCCGCACCGCTGATGAGCTCGAGCTCGCCACGCTCTCCTGGGTGCACTGGTTCAACGAGAACCGGCTGCACTCCTCGATCGGATACCTCACGCCGGTCGAGAAGGAGAACGAGTACTACCGTGAGATCAACTCCCAGAGCCGCCCGGCGCTGGGAGAACTCGCCCTCCACTAA
PROTEIN sequence
Length: 295
VLTEHGVQIAPSGYYAFKTRPVSARAVRDAELIVQIERVFWDRKLGRGISGVRKVWHLLRREGILVARCTVERLMRQQGLRGIRRGKQFVTTRPDDAATRPPDHVQRCFRADRPNELWVVDFTYVPTWSGMAFTAFVTDVFSRRIVGWRTMSKMPTDLPLDALEMALWVRDRAGEDVTGVIQHSDAGSQYTALRYSERLADVGAIASIGTVGDSYDNALAETVVGLYKTECVKVDGPFRTADELELATLSWVHWFNENRLHSSIGYLTPVEKENEYYREINSQSRPALGELALH*