ggKbase home page

SCNpilot_cont_300_bf_scaffold_4123_curated_13

Organism: scnpilot_dereplicated_Microbacterium_2

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 11 / 38
Location: comp(8738..9253)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036ABADE similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 170.0
  • Bit_score: 224
  • Evalue 9.30e-56
Regulatory protein TetR {ECO:0000313|EMBL:CDK00179.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 171.0
  • Bit_score: 259
  • Evalue 4.80e-66
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 169.0
  • Bit_score: 133
  • Evalue 8.90e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
CCGTCCAAGAACCACCTCATCCAAGAGCTGTACCTCGATGTGCAGCAGGCGCATCGCGCGGCGGCGATGCCCCTCCTGGCGCAGGAGTCGCGGCTGATCGACCGCCTGCGCATCGTGTACTCCACGGGTCTCGATGAGCTCGAGCCCTACCACTCCCACGCGGGTGAGTTCCTGTCCGCCGCCGTGTCGCCGCGGTCGCCGATCAACCCGCTGTCCACCGAGTCCGCCGAAGCGCTCGCGATCGTCCAGGACCTGTTCACCGAGGCCGTCGACGGTGCCACGGGCGCGCGCATTCCCGACGACGTCCGCGTGCTCCTTCCTCGTGCGCTGGTCCTCGCGCACCTTCTCCTCGCGCTGTTCTGGGTGTACGACACTTCCGCGGGGCGTCGGCGTACACGAGCGCTCCTGGAGGGCGGGCTGAAGCTGCTCGGGACGGGGCTCCCTCTGGTGCGCCTCCCGCTGCTGCGCGGCATGGTGCGCGACATGCTCTCGCTCGTGAGCGACGTGCGCGCGTGA
PROTEIN sequence
Length: 172
PSKNHLIQELYLDVQQAHRAAAMPLLAQESRLIDRLRIVYSTGLDELEPYHSHAGEFLSAAVSPRSPINPLSTESAEALAIVQDLFTEAVDGATGARIPDDVRVLLPRALVLAHLLLALFWVYDTSAGRRRTRALLEGGLKLLGTGLPLVRLPLLRGMVRDMLSLVSDVRA*